RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
SMARCE1-205ENST00000431889 ABRAQ8N0Z2 381 aa17.01■□□□□ 0.31
SMARCE1-205ENST00000431889 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
SMARCE1-205ENST00000431889 XPNPEP3Q9NQH7 507 aa17.01■□□□□ 0.31
SMARCE1-205ENST00000431889 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
SMARCE1-205ENST00000431889 MCM3APO60318 1980 aa17.01■□□□□ 0.31
SMARCE1-205ENST00000431889 ROBO3Q96MS0 1386 aa17■□□□□ 0.31
SMARCE1-205ENST00000431889 CDH23Q9H251 3354 aa17■□□□□ 0.31
SMARCE1-205ENST00000431889 IGKV6D-41A0A0C4DH26 115 aa17■□□□□ 0.31
SMARCE1-205ENST00000431889 CTDSPL2Q05D32 466 aa17■□□□□ 0.31
SMARCE1-205ENST00000431889 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
SMARCE1-205ENST00000431889 NYAP2Q9P242 653 aa17■□□□□ 0.31
SMARCE1-205ENST00000431889 DDX49Q9Y6V7 483 aaKnown RBP17■□□□□ 0.31
SMARCE1-205ENST00000431889 NMT2O60551 498 aa16.99■□□□□ 0.31
SMARCE1-205ENST00000431889 TFAP4Q01664 338 aa16.99■□□□□ 0.31
SMARCE1-205ENST00000431889 LRIT3Q3SXY7 679 aa16.99■□□□□ 0.31
SMARCE1-205ENST00000431889 BADQ92934 168 aa16.99■□□□□ 0.31
SMARCE1-205ENST00000431889 DDX11Q96FC9 970 aa16.99■□□□□ 0.31
SMARCE1-205ENST00000431889 MTMR4Q9NYA4 1195 aa16.99■□□□□ 0.31
SMARCE1-205ENST00000431889 PRKAG2Q9UGJ0 569 aa16.99■□□□□ 0.31
SMARCE1-205ENST00000431889 ZFYP08048 801 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 ZNF865P0CJ78 1059 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 TSPY3P0CV98 308 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 TSPY8P0CW00 308 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 RARBP10826 455 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 C9orf50Q5SZB4 431 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 VPS53Q5VIR6 699 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 GIMAP6Q6P9H5 292 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 TEX13BQ9BXU2 312 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 NAPBQ9H115 298 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 ZHX1Q9UKY1 873 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 CTDP1Q9Y5B0 961 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 TACC3Q9Y6A5 838 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 FOXP2O15409 715 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 GNAT2P19087 354 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 MX1P20591 662 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 PTGS1P23219 599 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 ITGB8P26012 769 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 RRP1P56182 461 aaKnown RBP16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 PPARAQ07869 468 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 SHHQ15465 462 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 TRIM43Q96BQ3 446 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-205ENST00000431889 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
SMARCE1-205ENST00000431889 MYADML2A6NDP7 307 aa16.97■□□□□ 0.31
SMARCE1-205ENST00000431889 PQBP1O60828 265 aaKnown RBP16.97■□□□□ 0.31
SMARCE1-205ENST00000431889 ZBED4O75132 1171 aa16.97■□□□□ 0.31
SMARCE1-205ENST00000431889 SNAI1O95863 264 aaPredicted RBP16.97■□□□□ 0.31
SMARCE1-205ENST00000431889 ZMYM1Q5SVZ6 1142 aa16.97■□□□□ 0.31
SMARCE1-205ENST00000431889 PRPF38AQ8NAV1 312 aaKnown RBP16.97■□□□□ 0.31
SMARCE1-205ENST00000431889 TMEM232C9JQI7 657 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 ERC2O15083 957 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 ADCY6O43306 1168 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 TTLL1O95922 423 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 MCCP23508 829 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 TLE2Q04725 743 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 IKQ13123 557 aaPredicted RBP16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 PDLIM7Q9NR12 457 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 MTMR10Q9NXD2 777 aa16.96■□□□□ 0.31
SMARCE1-205ENST00000431889 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 CNTN2Q02246 1040 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 KCTD1Q719H9 257 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 ANKRD35Q8N283 1001 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 AGBL1Q96MI9 1066 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 NACAP1Q9BZK3 213 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
SMARCE1-205ENST00000431889 BMP3P12645 472 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 AKR1A1P14550 325 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 PDE4BQ07343 736 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 RNF180Q86T96 592 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 FGD4Q96M96 766 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 SYNRGQ9UMZ2 1314 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 PRUNE2Q8WUY3 3088 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 DNAJC25-GNG10A0A024R161 153 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 MKL1Q969V6 931 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 PURBQ96QR8 312 aaKnown RBP16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 IL17RBQ9NRM6 502 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 PHF24Q9UPV7 400 aa16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 DIS3Q9Y2L1 958 aaKnown RBP16.94■□□□□ 0.3
SMARCE1-205ENST00000431889 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 ADAMTS4O75173 837 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 EPHB4P54760 987 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 SNX17Q15036 470 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 RRP12Q5JTH9 1297 aaKnown RBP16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 GMCL1P1Q8NEA9 526 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 ZNF287Q9HBT7 754 aa16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.93■□□□□ 0.3
SMARCE1-205ENST00000431889 DLL1O00548 723 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms