RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 LINC00310P59036 64 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 DLG4P78352 724 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 AUHQ13825 339 aaKnown RBP8.04□□□□□ -1.12
PTPN4-204ENST00000431283 OLFML2BQ68BL8 750 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 NLRX1Q86UT6 975 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 TMEM192Q8IY95 271 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 FCRL2Q96LA5 508 aaPredicted RBP8.04□□□□□ -1.12
PTPN4-204ENST00000431283 BACH2Q9BYV9 841 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 METTL5Q9NRN9 209 aaKnown RBP8.04□□□□□ -1.12
PTPN4-204ENST00000431283 TNFRSF10DQ9UBN6 386 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 TAF6LQ9Y6J9 622 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 TEX51A0A1B0GUA7 166 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 TMEM82A0PJX8 343 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 ARL4AP40617 200 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 BBS9Q3SYG4 887 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 INTS3Q68E01 1043 aaKnown RBP8.03□□□□□ -1.12
PTPN4-204ENST00000431283 C1QL4Q86Z23 238 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 RNF34Q969K3 372 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 HHIPL1Q96JK4 782 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 SLC9A7Q96T83 725 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 CRTAC1Q9NQ79 661 aa8.03□□□□□ -1.12
PTPN4-204ENST00000431283 RFXAPO00287 272 aa8.02□□□□□ -1.13
PTPN4-204ENST00000431283 CWF19L1Q69YN2 538 aaKnown RBP8.02□□□□□ -1.13
PTPN4-204ENST00000431283 GALNT18Q6P9A2 607 aa8.02□□□□□ -1.13
PTPN4-204ENST00000431283 LCNL1Q6ZST4 164 aa8.02□□□□□ -1.13
PTPN4-204ENST00000431283 SHISA4Q96DD7 197 aa8.02□□□□□ -1.13
PTPN4-204ENST00000431283 SIRT5Q9NXA8 310 aa8.02□□□□□ -1.13
PTPN4-204ENST00000431283 SUCOQ9UBS9 1254 aaKnown RBP8.02□□□□□ -1.13
PTPN4-204ENST00000431283 CNOT6Q9ULM6 557 aaKnown RBP8.02□□□□□ -1.13
PTPN4-204ENST00000431283 ZNRF3Q9ULT6 936 aa8.02□□□□□ -1.13
PTPN4-204ENST00000431283 MINPP1Q9UNW1 487 aa8.02□□□□□ -1.13
PTPN4-204ENST00000431283 WTIPA6NIX2 430 aaPredicted RBP8.01□□□□□ -1.13
PTPN4-204ENST00000431283 BMP8BP34820 402 aa8.01□□□□□ -1.13
PTPN4-204ENST00000431283 NOL9Q5SY16 702 aaKnown RBP8.01□□□□□ -1.13
PTPN4-204ENST00000431283 LCE1DQ5T752 114 aa8.01□□□□□ -1.13
PTPN4-204ENST00000431283 ZPBP2Q6X784 338 aa8.01□□□□□ -1.13
PTPN4-204ENST00000431283 TM9SF2Q99805 663 aa8.01□□□□□ -1.13
PTPN4-204ENST00000431283 IRF2BPLQ9H1B7 796 aa8.01□□□□□ -1.13
PTPN4-204ENST00000431283 PRR13Q9NZ81 148 aa8.01□□□□□ -1.13
PTPN4-204ENST00000431283 MYOCOSA0A1B0GUC4 107 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 A0A1W2PQ27 194 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 A0A1W2PQ64 194 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 A0A1W2PQC6 194 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 A0A1W2PQD8 194 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 PNLIPP16233 465 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 MFAP1P55081 439 aaKnown RBP8□□□□□ -1.13
PTPN4-204ENST00000431283 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
PTPN4-204ENST00000431283 FANCCQ00597 558 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 ZNF394Q53GI3 561 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 AMIGO3Q86WK7 504 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 NAT16Q8N8M0 369 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 SMARCC1Q92922 1105 aaPredicted RBP8□□□□□ -1.13
PTPN4-204ENST00000431283 CRBNQ96SW2 442 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 GPR55Q9Y2T6 319 aaPredicted RBP8□□□□□ -1.13
PTPN4-204ENST00000431283 PCDHGB7Q9Y5F8 929 aa8□□□□□ -1.13
PTPN4-204ENST00000431283 NOTOA8MTQ0 251 aa7.99□□□□□ -1.13
PTPN4-204ENST00000431283 ABLIM1O14639 778 aa7.99□□□□□ -1.13
PTPN4-204ENST00000431283 MPOP05164 745 aa7.99□□□□□ -1.13
PTPN4-204ENST00000431283 GSNP06396 782 aa7.99□□□□□ -1.13
PTPN4-204ENST00000431283 PMS1P54277 932 aaKnown RBP7.99□□□□□ -1.13
PTPN4-204ENST00000431283 ZNF385BQ569K4 471 aa7.99□□□□□ -1.13
PTPN4-204ENST00000431283 C7orf61Q8IZ16 206 aa7.99□□□□□ -1.13
PTPN4-204ENST00000431283 HRKO00198 91 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 ZNF205O95201 554 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 VAV1P15498 845 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 TMEM62Q0P6H9 643 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 LAPTM5Q13571 262 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 LDLRAD1Q5T700 205 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 CRTC3Q6UUV7 619 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 TAB3Q8N5C8 712 aaPredicted RBP7.98□□□□□ -1.13
PTPN4-204ENST00000431283 SGPP1Q9BX95 441 aa7.98□□□□□ -1.13
PTPN4-204ENST00000431283 A0A1W2PQ45 241 aaPredicted RBP7.97□□□□□ -1.13
PTPN4-204ENST00000431283 A0A1W2PQY0 241 aa7.97□□□□□ -1.13
PTPN4-204ENST00000431283 FADS2P1A8MWK0 482 aa7.97□□□□□ -1.13
PTPN4-204ENST00000431283 HSF5Q4G112 596 aaPredicted RBP7.97□□□□□ -1.13
PTPN4-204ENST00000431283 TDRD10Q5VZ19 366 aaKnown RBP7.97□□□□□ -1.13
PTPN4-204ENST00000431283 AP5S1Q9NUS5 200 aa7.97□□□□□ -1.13
PTPN4-204ENST00000431283 ERVK13-1Q9NX77 482 aa7.97□□□□□ -1.13
PTPN4-204ENST00000431283 IRAK3Q9Y616 596 aa7.97□□□□□ -1.13
PTPN4-204ENST00000431283 GSTM1P09488 218 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 ACRP10323 421 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 PRKCAP17252 672 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 SDHBP21912 280 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 CTSKP43235 329 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 CYP4F8P98187 520 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 TCERG1LQ5VWI1 586 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 JAMLQ86YT9 394 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 TMEM151BQ8IW70 566 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 RGS22Q8NE09 1264 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 NUP43Q8NFH3 380 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 PLCD4Q9BRC7 762 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 FAM86C1Q9NVL1 165 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 PPT2Q9UMR5 302 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 KCTD3Q9Y597 815 aa7.96□□□□□ -1.14
PTPN4-204ENST00000431283 A0A1W2PQJ5 194 aa7.95□□□□□ -1.14
PTPN4-204ENST00000431283 C9IYK1 514 aa7.95□□□□□ -1.14
PTPN4-204ENST00000431283 SCAMP3O14828 347 aaKnown RBP7.95□□□□□ -1.14
PTPN4-204ENST00000431283 TP53P04637 393 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms