RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 IRX3P78415 501 aaPredicted RBP14.56□□□□□ -0.08
USP40-205ENST00000430158 ZNF543Q08ER8 600 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 WTAPQ15007 396 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 SLC35G1Q2M3R5 365 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 Q3C1V9 767 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 TTBK2Q6IQ55 1244 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 ATG4CQ96DT6 458 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 TANGO6Q9C0B7 1094 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 KAT14Q9H8E8 782 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 BTBD7Q9P203 1132 aa14.56□□□□□ -0.08
USP40-205ENST00000430158 TMEM232C9JQI7 657 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 FLOT1O75955 427 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 CASTP20810 708 aaKnown RBP14.55□□□□□ -0.08
USP40-205ENST00000430158 PSMA5P28066 241 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 RBM25P49756 843 aaKnown RBP14.55□□□□□ -0.08
USP40-205ENST00000430158 LBX1P52954 281 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 EVCP57679 992 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 SART3Q15020 963 aaKnown RBP14.55□□□□□ -0.08
USP40-205ENST00000430158 FAM110CQ1W6H9 321 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 BLOC1S2Q6QNY1 142 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 KCTD1Q719H9 257 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 RUFY3Q7L099 469 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 ZNF296Q8WUU4 475 aaPredicted RBP14.55□□□□□ -0.08
USP40-205ENST00000430158 CHMP4CQ96CF2 233 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 SLF1Q9BQI6 1058 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 FEM1BQ9UK73 627 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 BRPF3Q9ULD4 1205 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 RABGAP1Q9Y3P9 1069 aa14.55□□□□□ -0.08
USP40-205ENST00000430158 PALM3A6NDB9 673 aaPredicted RBP14.54□□□□□ -0.08
USP40-205ENST00000430158 VWA5AO00534 786 aa14.54□□□□□ -0.08
USP40-205ENST00000430158 RAD21O60216 631 aa14.54□□□□□ -0.08
USP40-205ENST00000430158 TOB2Q14106 344 aaPredicted RBP14.54□□□□□ -0.08
USP40-205ENST00000430158 GRM4Q14833 912 aa14.54□□□□□ -0.08
USP40-205ENST00000430158 TMTC2Q8N394 836 aa14.54□□□□□ -0.08
USP40-205ENST00000430158 STAG2Q8N3U4 1231 aa14.54□□□□□ -0.08
USP40-205ENST00000430158 ANKRD13CQ8N6S4 541 aa14.54□□□□□ -0.08
USP40-205ENST00000430158 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
USP40-205ENST00000430158 GTF3C2Q8WUA4 911 aaPredicted RBP14.54□□□□□ -0.08
USP40-205ENST00000430158 ALDH8A1Q9H2A2 487 aaPredicted RBP14.54□□□□□ -0.08
USP40-205ENST00000430158 MAD2L2Q9UI95 211 aa14.54□□□□□ -0.08
USP40-205ENST00000430158 ZNFX1Q9P2E3 1918 aaKnown RBP14.54□□□□□ -0.08
USP40-205ENST00000430158 FRMPD2Q68DX3 1309 aaPredicted RBP14.53□□□□□ -0.08
USP40-205ENST00000430158 ERICH2A1L162 156 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 FKTNO75072 461 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 SP3Q02447 781 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 TMEM132BQ14DG7 1078 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 Q6ZUG5 572 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 FAM160B2Q86V87 743 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 ZNF654Q8IZM8 581 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 MB21D1Q8N884 522 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 SMCR8Q8TEV9 937 aaPredicted RBP14.53□□□□□ -0.08
USP40-205ENST00000430158 MAP3K14Q99558 947 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 C22orf23Q9BZE7 217 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 UPF3BQ9BZI7 483 aaKnown RBP14.53□□□□□ -0.08
USP40-205ENST00000430158 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 ZNF214Q9UL59 606 aaPredicted RBP14.53□□□□□ -0.08
USP40-205ENST00000430158 PRR12Q9ULL5 1215 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
USP40-205ENST00000430158 PLXNB2O15031 1838 aa14.52□□□□□ -0.08
USP40-205ENST00000430158 ZNF536O15090 1300 aa14.52□□□□□ -0.08
USP40-205ENST00000430158 ATP2A1O14983 1001 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 DDAH1O94760 285 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 SLC16A2P36021 539 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 STAT2P52630 851 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 ERVK-9P63128 1117 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 ERVK-24P63145 666 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 LACTBP83111 547 aaPredicted RBP14.52□□□□□ -0.09
USP40-205ENST00000430158 ASPRV1Q53RT3 343 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 GPATCH4Q5T3I0 446 aaKnown RBP14.52□□□□□ -0.09
USP40-205ENST00000430158 APOA5Q6Q788 366 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 GPRC5AQ8NFJ5 357 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 CHURC1Q8WUH1 139 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 MYL10Q9BUA6 226 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 ARHGAP39Q9C0H5 1083 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 CPVLQ9H3G5 476 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 GPCPD1Q9NPB8 672 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 PRDM10Q9NQV6 1147 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 FAM217BQ9NTX9 383 aaPredicted RBP14.52□□□□□ -0.09
USP40-205ENST00000430158 HPS5Q9UPZ3 1129 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 CYP46A1Q9Y6A2 500 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 MYH6P13533 1939 aa14.52□□□□□ -0.09
USP40-205ENST00000430158 PARP1P09874 1014 aaKnown RBP14.51□□□□□ -0.09
USP40-205ENST00000430158 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 LCE2DQ5TA82 110 aaPredicted RBP14.51□□□□□ -0.09
USP40-205ENST00000430158 SYDE2Q5VT97 1194 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 CATIPQ7Z7H3 387 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 NBPF11Q86T75 865 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 BRF1Q92994 677 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 KIFC2Q96AC6 838 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 MTMR8Q96EF0 704 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 TRIM47Q96LD4 638 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 TBC1D32Q96NH3 1257 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 UBA5Q9GZZ9 404 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 PORCNQ9H237 461 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 RANBP17Q9H2T7 1088 aaKnown RBP14.51□□□□□ -0.09
USP40-205ENST00000430158 HTTP42858 3142 aa14.51□□□□□ -0.09
USP40-205ENST00000430158 NID2Q14112 1375 aa14.5□□□□□ -0.09
USP40-205ENST00000430158 CYTH3O43739 400 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms