RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
PTPRF-206ENST00000429895 PLCB1Q9NQ66 1216 aa16.94■□□□□ 0.3
PTPRF-206ENST00000429895 GNA14O95837 355 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 ADCY8P40145 1251 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 FBXO11Q86XK2 927 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 CCDC127Q96BQ5 260 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 C1orf112Q9NSG2 853 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 PCDHA12Q9UN75 941 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 RAPGEF6Q8TEU7 1601 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 TRAPPC8Q9Y2L5 1435 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 TUBB2AQ13885 445 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 KRT71Q3SY84 523 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 TBC1D10BQ4KMP7 808 aaPredicted RBP16.93■□□□□ 0.3
PTPRF-206ENST00000429895 TUBB2BQ9BVA1 445 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 TEKT3Q9BXF9 490 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 NUP160Q12769 1436 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 KCNJ18B7U540 433 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 KCNK3O14649 394 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 KCNJ12Q14500 433 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 LMNTD2Q8IXW0 634 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 NEURL1BA8MQ27 555 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 UBXN2AP68543 259 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 RBBP5Q15291 538 aaKnown RBP16.93■□□□□ 0.3
PTPRF-206ENST00000429895 ICA1Q05084 483 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 MAP7Q14244 749 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 HADHQ16836 314 aaKnown RBP16.93■□□□□ 0.3
PTPRF-206ENST00000429895 ANKRD20A3Q5VUR7 823 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 PLA2G4DQ86XP0 818 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 DCLK2Q8N568 766 aa16.93■□□□□ 0.3
PTPRF-206ENST00000429895 TMEM232C9JQI7 657 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 GSTA1P08263 222 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 GSTA2P09210 222 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 PDE6CP51160 858 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 DCAF15Q66K64 600 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 VCXQ9H320 206 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 AOX1Q06278 1338 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 KIF3CO14782 793 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 TMEM191BP0C7N4 346 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 CCDC84Q86UT8 332 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-206ENST00000429895 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 CCPG1Q9ULG6 757 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 CLRN2A0PK11 232 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 MYCP01106 439 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-206ENST00000429895 MORC3Q14149 939 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 CCDC13Q8IYE1 715 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 IFNL3Q8IZI9 196 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 GBP7Q8N8V2 638 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-206ENST00000429895 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-206ENST00000429895 RAB3IPQ96QF0 476 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-206ENST00000429895 STK38LQ9Y2H1 464 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 INPP5BP32019 993 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 RFC1P35251 1148 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-206ENST00000429895 PIK3CAP42336 1068 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 POMGNT1Q8WZA1 660 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 HESX1Q9UBX0 185 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 KIF11P52732 1056 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 DMP1Q13316 513 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-206ENST00000429895 IWS1Q96ST2 819 aa16.92■□□□□ 0.3
PTPRF-206ENST00000429895 MTMR3Q13615 1198 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 PPP4R1Q8TF05 950 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 DSCC1Q9BVC3 393 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
PTPRF-206ENST00000429895 STX2P32856 288 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 HS1BP3Q53T59 392 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 PPM1KQ8N3J5 372 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 CHMP6Q96FZ7 201 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
PTPRF-206ENST00000429895 ARHGAP24Q8N264 748 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 CABS1Q96KC9 395 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 RAB17Q9H0T7 212 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 KIF9Q9HAQ2 790 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 IMPACTQ9P2X3 320 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 KCNG1Q9UIX4 513 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 BZW2Q9Y6E2 419 aaKnown RBP16.91■□□□□ 0.3
PTPRF-206ENST00000429895 HOXB7P09629 217 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 FAM178BQ8IXR5 827 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 SPICE1Q8N0Z3 855 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 UHMK1Q8TAS1 419 aaKnown RBP16.91■□□□□ 0.3
PTPRF-206ENST00000429895 ARHGAP6O43182 974 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 PABPC4Q13310 644 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTPRF-206ENST00000429895 MUM1L1Q5H9M0 696 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 DPP9Q86TI2 863 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 PNMA1Q8ND90 353 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 RPS6KC1Q96S38 1066 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 SLC39A2Q9NP94 309 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 DISC1Q9NRI5 854 aa16.91■□□□□ 0.3
PTPRF-206ENST00000429895 KLRF2D3W0D1 207 aa16.9■□□□□ 0.3
PTPRF-206ENST00000429895 MCF2L2Q86YR7 1114 aa16.9■□□□□ 0.3
PTPRF-206ENST00000429895 TRIM56Q9BRZ2 755 aaKnown RBP16.9■□□□□ 0.3
PTPRF-206ENST00000429895 DPH5Q9H2P9 285 aa16.9■□□□□ 0.3
PTPRF-206ENST00000429895 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
PTPRF-206ENST00000429895 KRIT1O00522 736 aa16.9■□□□□ 0.3
PTPRF-206ENST00000429895 NOC2LQ9Y3T9 749 aaKnown RBP16.9■□□□□ 0.3
PTPRF-206ENST00000429895 ARHGAP42A6NI28 874 aa16.9■□□□□ 0.3
PTPRF-206ENST00000429895 RGS16O15492 202 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms