RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 FBXO28Q9NVF7 368 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 CNMDO75829 334 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 LBX1P52954 281 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 ERVK-9P63128 1117 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 ERVK-24P63145 666 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 CCDC96Q2M329 555 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 Q6ZUG5 572 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 ATG4CQ96DT6 458 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 TXNRD2Q9NNW7 524 aa17.45■□□□□ 0.38
GARNL3-204ENST00000429629 GPHNQ9NQX3 736 aaPredicted RBP17.45■□□□□ 0.38
GARNL3-204ENST00000429629 SLC25A27O95847 323 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 MAPK4P31152 587 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 PRMT2P55345 433 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 FGD1P98174 961 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 ANKRD1Q15327 319 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 Q3C1V9 767 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 SYDE2Q5VT97 1194 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 APOA5Q6Q788 366 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 SPATC1LQ9H0A9 340 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 BTBD7Q9P203 1132 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 MAD2L2Q9UI95 211 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 ZNF214Q9UL59 606 aaPredicted RBP17.44■□□□□ 0.38
GARNL3-204ENST00000429629 PRR12Q9ULL5 1215 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 PTPRFP10586 1907 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 MYH8P13535 1937 aa17.44■□□□□ 0.38
GARNL3-204ENST00000429629 STAT3P40763 770 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 TMEM132BQ14DG7 1078 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 TTBK2Q6IQ55 1244 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.43■□□□□ 0.38
GARNL3-204ENST00000429629 RIOX2Q8IUF8 465 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
GARNL3-204ENST00000429629 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 LRRC2Q9BYS8 371 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 MAF1Q9H063 256 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 RANBP17Q9H2T7 1088 aaKnown RBP17.43■□□□□ 0.38
GARNL3-204ENST00000429629 MROH8Q9H579 483 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 PDRG1Q9NUG6 133 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
GARNL3-204ENST00000429629 CCDC196A0A1B0GTZ2 297 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 KLRF2D3W0D1 207 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 STRNO43815 780 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 CPA1P15085 419 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 HOXD10P28358 340 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 FCGRTP55899 365 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 TRAF1Q13077 416 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
GARNL3-204ENST00000429629 TKFCQ3LXA3 575 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 BRF1Q92994 677 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 MTMR8Q96EF0 704 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 ZNF274Q96GC6 653 aaPredicted RBP17.42■□□□□ 0.38
GARNL3-204ENST00000429629 TBC1D32Q96NH3 1257 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 TEX13BQ9BXU2 312 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 RIOX1Q9H6W3 641 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
GARNL3-204ENST00000429629 RBM28Q9NW13 759 aaKnown RBP17.42■□□□□ 0.38
GARNL3-204ENST00000429629 ZBTB43O43298 467 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 PKN2Q16513 984 aaKnown RBP17.41■□□□□ 0.38
GARNL3-204ENST00000429629 ABRAQ8N0Z2 381 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 TCEANC2Q96MN5 208 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 KIF2CQ99661 725 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 PAGR1Q9BTK6 254 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 MOV10L1Q9BXT6 1211 aaKnown RBP17.41■□□□□ 0.38
GARNL3-204ENST00000429629 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
GARNL3-204ENST00000429629 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 MTMR7Q9Y216 660 aa17.41■□□□□ 0.38
GARNL3-204ENST00000429629 CTDP1Q9Y5B0 961 aaPredicted RBP17.41■□□□□ 0.38
GARNL3-204ENST00000429629 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
GARNL3-204ENST00000429629 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 ICAM1P05362 532 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 SLC16A2P36021 539 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 PSMC4P43686 418 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 TOB2Q14106 344 aaPredicted RBP17.4■□□□□ 0.38
GARNL3-204ENST00000429629 RASGRP2Q7LDG7 609 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 ADGRF4Q8IZF3 695 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 STAG2Q8N3U4 1231 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 NUP133Q8WUM0 1156 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 EFCC1Q9HA90 598 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
GARNL3-204ENST00000429629 NID2Q14112 1375 aa17.4■□□□□ 0.38
GARNL3-204ENST00000429629 NEK4P51957 841 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 RABEP1Q15276 862 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
GARNL3-204ENST00000429629 CCAR1Q8IX12 1150 aaKnown RBP17.39■□□□□ 0.37
GARNL3-204ENST00000429629 CHST13Q8NET6 341 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 COA7Q96BR5 231 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 TRIM47Q96LD4 638 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 JMJD4Q9H9V9 463 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 FBXO40Q9UH90 709 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 ZNF536O15090 1300 aa17.39■□□□□ 0.37
GARNL3-204ENST00000429629 FMNL1O95466 1100 aaPredicted RBP17.38■□□□□ 0.37
GARNL3-204ENST00000429629 PDIA3P30101 505 aaKnown RBP17.38■□□□□ 0.37
GARNL3-204ENST00000429629 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
GARNL3-204ENST00000429629 PLEKHH3Q7Z736 793 aa17.38■□□□□ 0.37
GARNL3-204ENST00000429629 CD99L2Q8TCZ2 262 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms