RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 GNAQP50148 359 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 AKAP17AQ02040 695 aaKnown RBP10.26□□□□□ -0.77
SMC6-204ENST00000428868 NR5A1Q13285 461 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 MTMR2Q13614 643 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 VGLL4Q14135 290 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 SUPT20HL1Q3ZLR7 823 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 EARS2Q5JPH6 523 aaKnown RBP10.26□□□□□ -0.77
SMC6-204ENST00000428868 PPP4R3BQ5MIZ7 849 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 NOL9Q5SY16 702 aaKnown RBP10.26□□□□□ -0.77
SMC6-204ENST00000428868 TNS4Q8IZW8 715 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 CLMNQ96JQ2 1002 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 PHF20Q9BVI0 1012 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 FBXO28Q9NVF7 368 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 WDR81Q562E7 1941 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 KIAA1217Q5T5P2 1943 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 DOCK5Q9H7D0 1870 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 TMEM232C9JQI7 657 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 WNT7AO00755 349 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 FIBPO43427 364 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 GPATCH4Q5T3I0 446 aaKnown RBP10.25□□□□□ -0.77
SMC6-204ENST00000428868 HEATR3Q7Z4Q2 680 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 PNMA8AQ86V59 439 aaPredicted RBP10.25□□□□□ -0.77
SMC6-204ENST00000428868 DIS3L2Q8IYB7 885 aaKnown RBP10.25□□□□□ -0.77
SMC6-204ENST00000428868 RASGRP4Q8TDF6 673 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 WASF1Q92558 559 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 COA7Q96BR5 231 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 HOOK2Q96ED9 719 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 MTMR8Q96EF0 704 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 GBP4Q96PP9 640 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 FEZ1Q99689 392 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 LZTS2Q9BRK4 669 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 LMBRD1Q9NUN5 540 aa10.25□□□□□ -0.77
SMC6-204ENST00000428868 TFIP11Q9UBB9 837 aaKnown RBP10.25□□□□□ -0.77
SMC6-204ENST00000428868 TRIM75PA6NK02 468 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 GADD45BO75293 160 aaPredicted RBP10.24□□□□□ -0.77
SMC6-204ENST00000428868 SMARCA1P28370 1054 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
SMC6-204ENST00000428868 SPP2Q13103 211 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 TRIM29Q14134 588 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 CDC37Q16543 378 aaPredicted RBP10.24□□□□□ -0.77
SMC6-204ENST00000428868 QRICH1Q2TAL8 776 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 MYSM1Q5VVJ2 828 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 BTNL9Q6UXG8 535 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 TNFRSF25Q93038 417 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 RRP36Q96EU6 259 aaKnown RBP10.24□□□□□ -0.77
SMC6-204ENST00000428868 USP28Q96RU2 1077 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 WDR18Q9BV38 432 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 ZNF408Q9H9D4 720 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 ELP3Q9H9T3 547 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 BARHL2Q9NY43 387 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 PRR12Q9ULL5 1215 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 SYNPO2Q9UMS6 1093 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 ZHX2Q9Y6X8 837 aa10.24□□□□□ -0.77
SMC6-204ENST00000428868 PLXNA1Q9UIW2 1896 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 VCAM1P19320 739 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 NCLP19338 710 aaKnown RBP10.23□□□□□ -0.77
SMC6-204ENST00000428868 U2AF2P26368 475 aaKnown RBP eCLIP10.23□□□□□ -0.776e-9■□□□□ 8.2
SMC6-204ENST00000428868 HMGCS2P54868 508 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 HTRA3P83110 453 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
SMC6-204ENST00000428868 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
SMC6-204ENST00000428868 ZNF280CQ8ND82 737 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 KIAA1683Q9H0B3 1180 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 ZSCAN16Q9H4T2 348 aaPredicted RBP10.23□□□□□ -0.77
SMC6-204ENST00000428868 SH2D4AQ9H788 454 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 PICK1Q9NRD5 415 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 AFG3L2Q9Y4W6 797 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 PLXNB2O15031 1838 aa10.23□□□□□ -0.77
SMC6-204ENST00000428868 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 M0R2N6 131 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 ZBTB5O15062 677 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 PPP1R12BO60237 982 aaPredicted RBP10.22□□□□□ -0.77
SMC6-204ENST00000428868 PRPF40AO75400 957 aaKnown RBP10.22□□□□□ -0.77
SMC6-204ENST00000428868 KRT2P35908 639 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 GJA5P36382 358 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 IREB2P48200 963 aaKnown RBP10.22□□□□□ -0.77
SMC6-204ENST00000428868 TOB1P50616 345 aaPredicted RBP10.22□□□□□ -0.77
SMC6-204ENST00000428868 NAPAP54920 295 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 BACE1P56817 501 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 NLRP5P59047 1200 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 IKQ13123 557 aaPredicted RBP10.22□□□□□ -0.77
SMC6-204ENST00000428868 MAP3K11Q16584 847 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 LDHDQ86WU2 507 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 NOSTRINQ8IVI9 506 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 JMYQ8N9B5 988 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 RGS22Q8NE09 1264 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 WNK4Q96J92 1243 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
SMC6-204ENST00000428868 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
SMC6-204ENST00000428868 CLIC4Q9Y696 253 aa10.22□□□□□ -0.77
SMC6-204ENST00000428868 MCM3APO60318 1980 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms