RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 KIF4BQ2VIQ3 1234 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 SWT1Q5T5J6 900 aaKnown RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 ADGRA1Q86SQ6 560 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 ENAHQ8N8S7 591 aaPredicted RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 ESR2Q92731 530 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 NAPGQ99747 312 aaPredicted RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 GNL3LQ9NVN8 582 aaKnown RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 NIP7Q9Y221 180 aaKnown RBP eCLIP9.95□□□□□ -0.82
CDH13-202ENST00000428848 EP400Q96L91 3159 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 SMIM22K7EJ46 135 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 TUBBP07437 444 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 BCAMP50895 628 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 SPAG1Q07617 926 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 TROAPQ12815 778 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 SUSD4Q5VX71 490 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 CYP26C1Q6V0L0 522 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 PACS2Q86VP3 889 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 MIGA1Q8NAN2 632 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 ZSCAN10Q96SZ4 725 aaPredicted RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 PDE11AQ9HCR9 933 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 RBM28Q9NW13 759 aaKnown RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 CTNND2Q9UQB3 1225 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 BAZ2BQ9UIF8 2168 aaKnown RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 ERLIN1O75477 346 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 PRDM1O75626 825 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 PLEKHA8P1O95397 391 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 TFRCP02786 760 aaKnown RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 CORO7P57737 925 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 VSNL1P62760 191 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 AKAP17AQ02040 695 aaKnown RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 PTGDRQ13258 359 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 ZNF174Q15697 407 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 IL17AQ16552 155 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 WDR93Q6P2C0 686 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 CCDC91Q7Z6B0 441 aa9.94□□□□□ -0.82
CDH13-202ENST00000428848 PYM1Q9BRP8 204 aaKnown RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 RIOK1Q9BRS2 568 aaKnown RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 REXO2Q9Y3B8 237 aaKnown RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
CDH13-202ENST00000428848 KAT6BQ8WYB5 2073 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 CTAGE15A4D2H0 777 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 EIF3CLB5ME19 914 aaKnown RBP9.93□□□□□ -0.82
CDH13-202ENST00000428848 N4BP3O15049 544 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 CTAGE8P0CG41 777 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 CDC25AP30304 524 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 CCT6AP40227 531 aaKnown RBP9.93□□□□□ -0.82
CDH13-202ENST00000428848 TRAPPC10P48553 1259 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 TCP11X2Q5H9J9 407 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 ZNF658Q5TYW1 1059 aaPredicted RBP9.93□□□□□ -0.82
CDH13-202ENST00000428848 TMTC3Q6ZXV5 915 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 CTAGE6Q86UF2 777 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 CTAGE4Q8IX94 777 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 SDR42E1Q8WUS8 393 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 EIF3CQ99613 913 aaKnown RBP9.93□□□□□ -0.82
CDH13-202ENST00000428848 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
CDH13-202ENST00000428848 ZNF804BA4D1E1 1349 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 CNTNAP5Q8WYK1 1306 aa9.93□□□□□ -0.82
CDH13-202ENST00000428848 ONECUT3O60422 494 aaPredicted RBP9.92□□□□□ -0.82
CDH13-202ENST00000428848 EIF3JO75822 258 aaKnown RBP9.92□□□□□ -0.82
CDH13-202ENST00000428848 DDAH1O94760 285 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 CALM1P0DP23 149 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 CALM2P0DP24 149 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 CALM3P0DP25 149 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 PCP11498 1178 aaKnown RBP9.92□□□□□ -0.82
CDH13-202ENST00000428848 CYP7A1P22680 504 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 PAK1Q13153 545 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 MCM6Q14566 821 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 RRAGBQ5VZM2 374 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 TMED8Q6PL24 325 aaPredicted RBP9.92□□□□□ -0.82
CDH13-202ENST00000428848 ZNF662Q6ZS27 426 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 TRAPPC11Q7Z392 1133 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 IRF2BP1Q8IU81 584 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 SUGCTQ9HAC7 445 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 MYO6Q9UM54 1294 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 COL4A1P02462 1669 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 hCG_1642624A0A1W2PR95 340 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 MINDY4BA8MYZ0 360 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 KCNJ18B7U540 433 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 PSMD14O00487 310 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 NTSR2O95665 410 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 KCNJ12Q14500 433 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 CASP8Q14790 479 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 MCTP2Q6DN12 878 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 MMS22LQ6ZRQ5 1243 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 CATIPQ7Z7H3 387 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 EFCAB13Q8IY85 973 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 C4orf32Q8N8J7 132 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 NOA1Q8NC60 698 aaKnown RBP9.92□□□□□ -0.82
CDH13-202ENST00000428848 NELFBQ8WX92 580 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 STAMQ92783 540 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 CEP89Q96ST8 783 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 BRIP1Q9BX63 1249 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 VPS16Q9H269 839 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 BLZF1Q9H2G9 400 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms