RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.32
CECR3-201ENST00000428828 BRF1Q92994 677 aa13.02□□□□□ -0.32
CECR3-201ENST00000428828 KLRG1Q96E93 195 aa13.02□□□□□ -0.32
CECR3-201ENST00000428828 CEP95Q96GE4 821 aa13.02□□□□□ -0.32
CECR3-201ENST00000428828 CCDC17Q96LX7 622 aa13.02□□□□□ -0.32
CECR3-201ENST00000428828 TTC14Q96N46 770 aa13.02□□□□□ -0.32
CECR3-201ENST00000428828 ZBTB21Q9ULJ3 1066 aa13.02□□□□□ -0.32
CECR3-201ENST00000428828 MTMR7Q9Y216 660 aa13.02□□□□□ -0.32
CECR3-201ENST00000428828 PTPRFP10586 1907 aa13.02□□□□□ -0.33
CECR3-201ENST00000428828 PLIN4Q96Q06 1357 aa13.02□□□□□ -0.33
CECR3-201ENST00000428828 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 RPS6KA5O75582 802 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 CCDC172P0C7W6 258 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 KCNJ6P48051 423 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 APOBRQ0VD83 1088 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 LRMPQ12912 555 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 TOB2Q14106 344 aaPredicted RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 WTAPQ15007 396 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 NFXL1Q6ZNB6 911 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 RBM43Q6ZSC3 357 aaKnown RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 TMEM179Q6ZVK1 233 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
CECR3-201ENST00000428828 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 ITGBL1O95965 494 aaPredicted RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 GUCY1A2P33402 732 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 IREB2P48200 963 aaKnown RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 CLCN6P51797 869 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 DHX8Q14562 1220 aaKnown RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 IFIT1BQ5T764 474 aaKnown RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 MNS1Q8NEH6 495 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.01□□□□□ -0.33
CECR3-201ENST00000428828 IGDCC4Q8TDY8 1250 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 CACTINQ8WUQ7 758 aaKnown RBP13.01□□□□□ -0.33
CECR3-201ENST00000428828 TMEM87BQ96K49 555 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 TRERF1Q96PN7 1200 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 MYH6P13533 1939 aa13.01□□□□□ -0.33
CECR3-201ENST00000428828 WDR19Q8NEZ3 1342 aa13□□□□□ -0.33
CECR3-201ENST00000428828 RAD21O60216 631 aa13□□□□□ -0.33
CECR3-201ENST00000428828 CTNND1O60716 968 aaKnown RBP13□□□□□ -0.33
CECR3-201ENST00000428828 ATP2B1P20020 1258 aa13□□□□□ -0.33
CECR3-201ENST00000428828 GSCP56915 257 aaPredicted RBP13□□□□□ -0.33
CECR3-201ENST00000428828 ICA1Q05084 483 aa13□□□□□ -0.33
CECR3-201ENST00000428828 MAP3K11Q16584 847 aa13□□□□□ -0.33
CECR3-201ENST00000428828 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
CECR3-201ENST00000428828 LRRC8AQ8IWT6 810 aa13□□□□□ -0.33
CECR3-201ENST00000428828 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
CECR3-201ENST00000428828 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
CECR3-201ENST00000428828 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
CECR3-201ENST00000428828 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
CECR3-201ENST00000428828 RRP15Q9Y3B9 282 aaKnown RBP13□□□□□ -0.33
CECR3-201ENST00000428828 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
CECR3-201ENST00000428828 CCDC69A6NI79 296 aa13□□□□□ -0.33
CECR3-201ENST00000428828 UBE2Q2LH0YL09 131 aa13□□□□□ -0.33
CECR3-201ENST00000428828 ASNSP08243 561 aa13□□□□□ -0.33
CECR3-201ENST00000428828 STK3Q13188 491 aa13□□□□□ -0.33
CECR3-201ENST00000428828 VGLL4Q14135 290 aa13□□□□□ -0.33
CECR3-201ENST00000428828 SEC23AQ15436 765 aa13□□□□□ -0.33
CECR3-201ENST00000428828 ARMC9Q7Z3E5 817 aa13□□□□□ -0.33
CECR3-201ENST00000428828 CCDC91Q7Z6B0 441 aa13□□□□□ -0.33
CECR3-201ENST00000428828 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
CECR3-201ENST00000428828 LRRC47Q8N1G4 583 aaKnown RBP13□□□□□ -0.33
CECR3-201ENST00000428828 MYL10Q9BUA6 226 aa13□□□□□ -0.33
CECR3-201ENST00000428828 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
CECR3-201ENST00000428828 PICK1Q9NRD5 415 aa13□□□□□ -0.33
CECR3-201ENST00000428828 MTMR4Q9NYA4 1195 aa13□□□□□ -0.33
CECR3-201ENST00000428828 DONSONQ9NYP3 566 aa13□□□□□ -0.33
CECR3-201ENST00000428828 CLIP2Q9UDT6 1046 aa13□□□□□ -0.33
CECR3-201ENST00000428828 ZNF112Q9UJU3 913 aa13□□□□□ -0.33
CECR3-201ENST00000428828 CSADQ9Y600 493 aa13□□□□□ -0.33
CECR3-201ENST00000428828 IGKV6D-41A0A0C4DH26 115 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 KLF18A0A0U1RQI7 1052 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 TOMM70O94826 608 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 F13A1P00488 732 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 EEF2P13639 858 aaKnown RBP12.99□□□□□ -0.33
CECR3-201ENST00000428828 RXRAP19793 462 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 TYRO3Q06418 890 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 TTC31Q49AM3 519 aaPredicted RBP12.99□□□□□ -0.33
CECR3-201ENST00000428828 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.99□□□□□ -0.33
CECR3-201ENST00000428828 C10orf67Q8IYJ2 551 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 NEK11Q8NG66 645 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 GBA2Q9HCG7 927 aaPredicted RBP12.99□□□□□ -0.33
CECR3-201ENST00000428828 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
CECR3-201ENST00000428828 TTLL1O95922 423 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CPP00450 1065 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 NT5C2P49902 561 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
CECR3-201ENST00000428828 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 DRC7Q8IY82 874 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
CECR3-201ENST00000428828 CCAR2Q8N163 923 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms