RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 USP14P54578 494 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 KIAA1755Q5JYT7 1200 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 WWC2Q6AWC2 1192 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 GALNT17Q6IS24 598 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 FAM173BQ6P4H8 233 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 DLK2Q6UY11 383 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 HEATR3Q7Z4Q2 680 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 HOMER1Q86YM7 354 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 DIS3L2Q8IYB7 885 aaKnown RBP14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 SPICE1Q8N0Z3 855 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 CHURC1Q8WUH1 139 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 SHISA4Q96DD7 197 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 CHAMP1Q96JM3 812 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 NUP88Q99567 741 aaPredicted RBP14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 GLIS2Q9BZE0 524 aaPredicted RBP14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 SCAND2PQ9GZW5 306 aaPredicted RBP14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 FZD1Q9UP38 647 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 CNPY2Q9Y2B0 182 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 BTBD18B2RXH4 712 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 KIF28PB7ZC32 967 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 C19orf81C9J6K1 198 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 NLRP5P59047 1200 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 PRKG1Q13976 671 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 ZYXQ15942 572 aaKnown RBP14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 MAP3K11Q16584 847 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 FAM83BQ5T0W9 1011 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 SYDE2Q5VT97 1194 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 FAM160B2Q86V87 743 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 TMEM87AQ8NBN3 555 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 ZNF280CQ8ND82 737 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 GPKOWQ92917 476 aaPredicted RBP eCLIP14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 CSADQ9Y600 493 aa14.63□□□□□ -0.07
HMGB3P4-201ENST00000428776 RLFQ13129 1914 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 COL11A1P12107 1806 aaPredicted RBP14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 SMCHD1A6NHR9 2005 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 WDR46O15213 610 aaKnown RBP14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 STAT2P52630 851 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 NAPAP54920 295 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 BACE1P56817 501 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 SPP2Q13103 211 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 IKQ13123 557 aaPredicted RBP14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 VGLL4Q14135 290 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 NBR1Q14596 966 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 MYSM1Q5VVJ2 828 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 LDHDQ86WU2 507 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 ANKRD13AQ8IZ07 590 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 DAGLBQ8NCG7 672 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 LMBRD1Q9NUN5 540 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 TFIP11Q9UBB9 837 aaKnown RBP14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 SNCAIPQ9Y6H5 919 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 ZHX2Q9Y6X8 837 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 LOC285556D6RIA3 1793 aa14.62□□□□□ -0.07
HMGB3P4-201ENST00000428776 ESYT2A0FGR8 921 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 UNCXA6NJT0 531 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 POTEJP0CG39 1038 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 GNA11P29992 359 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 TRAF1Q13077 416 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 MTMR2Q13614 643 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 NPY5RQ15761 445 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 SKOR2Q2VWA4 1001 aaPredicted RBP14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 PPP1R18Q6NYC8 613 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 ARMC9Q7Z3E5 817 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 OXER1Q8TDS5 423 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 ZMYND12Q9H0C1 365 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 C6orf50Q9HD87 102 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 PRR12Q9ULL5 1215 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 PCDHA4Q9UN74 947 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 AFG3L2Q9Y4W6 797 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 ELP1O95163 1332 aa14.61□□□□□ -0.07
HMGB3P4-201ENST00000428776 FIBPO43427 364 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 NR5A1Q13285 461 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 TTLL12Q14166 644 aaPredicted RBP14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 CDC37Q16543 378 aaPredicted RBP14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 QRICH1Q2TAL8 776 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 TYW1BQ6NUM6 668 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 BLIDQ8IZY5 108 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 BICD2Q8TD16 824 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 TNFRSF25Q93038 417 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 SPATA32Q96LK8 384 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 C12orf42Q96LP6 360 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 EMILIN3Q9NT22 766 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 RTEL1Q9NZ71 1219 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 RCOR1Q9UKL0 485 aa14.6□□□□□ -0.07
HMGB3P4-201ENST00000428776 SMCO2A6NFE2 343 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 TRIM75PA6NK02 468 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 PPP1R11O60927 126 aaPredicted RBP14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 PPATQ06203 517 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 ERO1BQ86YB8 467 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 PRPF38AQ8NAV1 312 aaKnown RBP14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 LEO1Q8WVC0 666 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms