RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 FERMT2Q96AC1 680 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 KIF1BPQ96EK5 621 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 PORCNQ9H237 461 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 ANTXR1Q9H6X2 564 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 FLRT1Q9NZU1 646 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 LRP2BPQ9P2M1 347 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 PLXNB2O15031 1838 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 LOC285556D6RIA3 1793 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 GLRX3O76003 335 aaKnown RBP10.35□□□□□ -0.75
HDAC1-202ENST00000428704 LDHCP07864 332 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 SDSP20132 328 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 ERVK-24P63145 666 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 NHLH1Q02575 133 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 MAP3K10Q02779 954 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 PICALMQ13492 652 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 NAA16Q6N069 864 aaPredicted RBP10.35□□□□□ -0.75
HDAC1-202ENST00000428704 CASC1Q6TDU7 716 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 SH3RF3Q8TEJ3 882 aaPredicted RBP10.35□□□□□ -0.75
HDAC1-202ENST00000428704 KIF2CQ99661 725 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 RBPJLQ9UBG7 517 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
HDAC1-202ENST00000428704 USP17L5A8MUK1 530 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 KIAA0355O15063 1070 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 ERC2O15083 957 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-202ENST00000428704 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-202ENST00000428704 MX1P20591 662 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 CYP2C19P33261 490 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 PPP4CP60510 307 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 Q3C1V9 767 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 WDR78Q5VTH9 848 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 ANO1Q5XXA6 986 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 CLASRPQ8N2M8 674 aaKnown RBP10.34□□□□□ -0.75
HDAC1-202ENST00000428704 OTUD7AQ8TE49 926 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-202ENST00000428704 HERVK_113Q902F9 699 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 UIMC1Q96RL1 719 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.34□□□□□ -0.754e-10■□□□□ 9.9
HDAC1-202ENST00000428704 USP26Q9BXU7 913 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 ADAM33Q9BZ11 813 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 OSBPL5Q9H0X9 879 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-202ENST00000428704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC1-202ENST00000428704 AS3MTQ9HBK9 375 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
HDAC1-202ENST00000428704 AATFQ9NY61 560 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC1-202ENST00000428704 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 PRR33A8MZF0 331 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 PQBP1O60828 265 aaKnown RBP10.33□□□□□ -0.76
HDAC1-202ENST00000428704 IGSF3O75054 1194 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 HOXA7P31268 230 aaPredicted RBP10.33□□□□□ -0.76
HDAC1-202ENST00000428704 MTMR2Q13614 643 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 RAB30Q15771 203 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 TRPV1Q8NER1 839 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 GTF3C2Q8WUA4 911 aaPredicted RBP10.33□□□□□ -0.76
HDAC1-202ENST00000428704 SLC28A3Q9HAS3 691 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 FLT1P17948 1338 aa10.33□□□□□ -0.76
HDAC1-202ENST00000428704 PI4K2BG5E9Z4 385 aa10.32□□□□□ -0.76
HDAC1-202ENST00000428704 TULP1O00294 542 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-202ENST00000428704 IDH1O75874 414 aaKnown RBP10.32□□□□□ -0.76
HDAC1-202ENST00000428704 REC8O95072 547 aa10.32□□□□□ -0.76
HDAC1-202ENST00000428704 IFIT2P09913 472 aaKnown RBP10.32□□□□□ -0.76
HDAC1-202ENST00000428704 CYBAP13498 195 aa10.32□□□□□ -0.76
HDAC1-202ENST00000428704 CYP7A1P22680 504 aa10.32□□□□□ -0.76
HDAC1-202ENST00000428704 DYNLL1P63167 89 aaKnown RBP10.32□□□□□ -0.76
HDAC1-202ENST00000428704 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
HDAC1-202ENST00000428704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC1-202ENST00000428704 IL17RAQ96F46 866 aa10.32□□□□□ -0.76
HDAC1-202ENST00000428704 NKX2-4Q9H2Z4 354 aa10.32□□□□□ -0.76
HDAC1-202ENST00000428704 BAZ2AQ9UIF9 1905 aaKnown RBP10.31□□□□□ -0.76
HDAC1-202ENST00000428704 SLC15A5A6NIM6 579 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 PTPREP23469 700 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 CCNA1P78396 465 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 RRP1BQ14684 758 aaKnown RBP10.31□□□□□ -0.76
HDAC1-202ENST00000428704 LRRC41Q15345 812 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 NFKBIBQ15653 356 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 MIGA1Q8NAN2 632 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 BCL11AQ9H165 835 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 DNAJC18Q9H819 358 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 COG5Q9UP83 839 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 CHD9Q3L8U1 2897 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 TTC41PQ6P2S7 1318 aa10.31□□□□□ -0.76
HDAC1-202ENST00000428704 TCF20Q9UGU0 1960 aaKnown RBP10.3□□□□□ -0.76
HDAC1-202ENST00000428704 TCRBV5S4A2TA0A5A2 114 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 GOLIM4O00461 696 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 ARHGAP33O14559 1287 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 SEPT4O43236 478 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 MAP3K7O43318 606 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 TLL1O43897 1013 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 BAG3O95817 575 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 HOXC6P09630 235 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 PDE6AP16499 860 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms