RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 ERVV-1B6SEH8 477 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 CHMP2AO43633 222 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 ABL1P00519 1130 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 NOP2P46087 812 aaKnown RBP16.88■□□□□ 0.29
SCAP-206ENST00000428413 KIAA0825Q8IV33 1275 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 C10orf67Q8IYJ2 551 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 IL17RAQ96F46 866 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 SLIT1O75093 1534 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 PRCPP42785 496 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 TTC19Q6DKK2 380 aaPredicted RBP16.88■□□□□ 0.29
SCAP-206ENST00000428413 CCDC148Q8NFR7 591 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
SCAP-206ENST00000428413 TRAF5O00463 557 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 BUB1O43683 1085 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 SYCP1Q15431 976 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 RAD9BQ6WBX8 426 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
SCAP-206ENST00000428413 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
SCAP-206ENST00000428413 RRP36Q96EU6 259 aaKnown RBP16.88■□□□□ 0.29
SCAP-206ENST00000428413 CALML3P27482 149 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 KLK7P49862 253 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 COPB1P53618 953 aaKnown RBP16.87■□□□□ 0.29
SCAP-206ENST00000428413 UBE4AQ14139 1066 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 LLGL1Q15334 1064 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 GRIK5Q16478 980 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 LINC00116Q8NCU8 138 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 ZC3H12CQ9C0D7 883 aaKnown RBP16.87■□□□□ 0.29
SCAP-206ENST00000428413 TMEM60Q9H2L4 133 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 ERLIN1O75477 346 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 LOC102724159A0A0B4J2E5 919 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 FCER1AP12319 257 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 UBXN2AP68543 259 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
SCAP-206ENST00000428413 PWP2Q15269 919 aaKnown RBP16.87■□□□□ 0.29
SCAP-206ENST00000428413 CCDC70Q6NSX1 233 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 DPP8Q6V1X1 898 aaPredicted RBP16.87■□□□□ 0.29
SCAP-206ENST00000428413 TMTC3Q6ZXV5 915 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 CNGA4Q8IV77 575 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 VGLL2Q8N8G2 317 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 LRWD1Q9UFC0 647 aa16.87■□□□□ 0.29
SCAP-206ENST00000428413 PSDA5PKW4 1024 aaPredicted RBP16.86■□□□□ 0.29
SCAP-206ENST00000428413 POTEMA6NI47 508 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
SCAP-206ENST00000428413 LDHCP07864 332 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 KRT26Q7Z3Y9 468 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 TC2NQ8N9U0 490 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 ENOX1Q8TC92 643 aaKnown RBP16.86■□□□□ 0.29
SCAP-206ENST00000428413 SNX29Q8TEQ0 813 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 SMCR8Q8TEV9 937 aaPredicted RBP16.86■□□□□ 0.29
SCAP-206ENST00000428413 C6orf50Q9HD87 102 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 ZBTB21Q9ULJ3 1066 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 NFAT5O94916 1531 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 NTSR2O95665 410 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 NYAP1Q6ZVC0 841 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 ZNF804AQ7Z570 1209 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
SCAP-206ENST00000428413 RASSF4Q9H2L5 321 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 PDE11AQ9HCR9 933 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 CAPN2P17655 700 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 CYP4A11Q02928 519 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 PRPF4BQ13523 1007 aaKnown RBP16.86■□□□□ 0.29
SCAP-206ENST00000428413 IFT81Q8WYA0 676 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 DDX41Q9UJV9 622 aaKnown RBP16.86■□□□□ 0.29
SCAP-206ENST00000428413 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
SCAP-206ENST00000428413 LTN1O94822 1766 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
SCAP-206ENST00000428413 RRAGAQ7L523 313 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 TBCKQ8TEA7 893 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
SCAP-206ENST00000428413 FERMT2Q96AC1 680 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 USP8P40818 1118 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
SCAP-206ENST00000428413 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 TUBE1Q9UJT0 475 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
SCAP-206ENST00000428413 STX10O60499 249 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 PLCG1P19174 1290 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 TMEM266Q2M3C6 531 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 RDH13Q8NBN7 331 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 ANKRD7Q92527 254 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAP-206ENST00000428413 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
SCAP-206ENST00000428413 MEIS1O00470 390 aa16.84■□□□□ 0.29
SCAP-206ENST00000428413 PLA2G12BQ9BX93 195 aa16.84■□□□□ 0.29
SCAP-206ENST00000428413 FGFR2P21802 821 aa16.84■□□□□ 0.29
SCAP-206ENST00000428413 TROAPQ12815 778 aa16.84■□□□□ 0.29
SCAP-206ENST00000428413 DCAF17Q5H9S7 520 aaPredicted RBP16.84■□□□□ 0.29
SCAP-206ENST00000428413 CNPY4Q8N129 248 aa16.84■□□□□ 0.29
SCAP-206ENST00000428413 NAPGQ99747 312 aaPredicted RBP16.84■□□□□ 0.29
SCAP-206ENST00000428413 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
SCAP-206ENST00000428413 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
SCAP-206ENST00000428413 RMND1Q9NWS8 449 aa16.84■□□□□ 0.29
SCAP-206ENST00000428413 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
SCAP-206ENST00000428413 PRPF3O43395 683 aaKnown RBP16.84■□□□□ 0.29
SCAP-206ENST00000428413 TAL1P17542 331 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms