RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TSGA10Q9BZW7 698 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 ANXA1P04083 346 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 MYO1EQ12965 1108 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 TTF1Q15361 905 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-206ENST00000428313 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
C9orf3-206ENST00000428313 IFT20Q8IY31 132 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 STAMBPL1Q96FJ0 436 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 AIFM3Q96NN9 605 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 GSDMAQ96QA5 445 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 NUP58Q9BVL2 599 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 LEMD3Q9Y2U8 911 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 PAK2Q13177 524 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 TRIM29Q14134 588 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 MEA1Q16626 185 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 PIK3R5Q8WYR1 880 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 CCT6BQ92526 530 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 HVCN1Q96D96 273 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 GDF3Q9NR23 364 aa17.91■□□□□ 0.46
C9orf3-206ENST00000428313 MAST3O60307 1309 aa17.9■□□□□ 0.46
C9orf3-206ENST00000428313 GSTA1P08263 222 aa17.9■□□□□ 0.46
C9orf3-206ENST00000428313 SH3RF1Q7Z6J0 888 aa17.9■□□□□ 0.46
C9orf3-206ENST00000428313 PPANQ9NQ55 473 aaKnown RBP17.9■□□□□ 0.46
C9orf3-206ENST00000428313 LUC7L2Q9Y383 392 aaKnown RBP17.9■□□□□ 0.46
C9orf3-206ENST00000428313 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
C9orf3-206ENST00000428313 PPIP5K2O43314 1243 aa17.89■□□□□ 0.46
C9orf3-206ENST00000428313 PAEPP09466 180 aa17.89■□□□□ 0.46
C9orf3-206ENST00000428313 TCP1P17987 556 aaKnown RBP17.89■□□□□ 0.46
C9orf3-206ENST00000428313 BYSLQ13895 437 aaKnown RBP17.89■□□□□ 0.46
C9orf3-206ENST00000428313 C8orf74Q6P047 294 aa17.89■□□□□ 0.46
C9orf3-206ENST00000428313 CCDC170Q8IYT3 715 aa17.89■□□□□ 0.46
C9orf3-206ENST00000428313 DRAXINQ8NBI3 349 aaPredicted RBP17.89■□□□□ 0.46
C9orf3-206ENST00000428313 KLHDC4Q8TBB5 520 aa17.89■□□□□ 0.46
C9orf3-206ENST00000428313 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.46
C9orf3-206ENST00000428313 CAPN11Q9UMQ6 739 aa17.89■□□□□ 0.46
C9orf3-206ENST00000428313 SRPRBQ9Y5M8 271 aaKnown RBP17.89■□□□□ 0.46
C9orf3-206ENST00000428313 TTC26A0AVF1 554 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 NEFHP12036 1026 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 ANTXR2P58335 489 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 SLC7A5Q01650 507 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 TFCP2Q12800 502 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 IMMTQ16891 758 aaKnown RBP17.89■□□□□ 0.45
C9orf3-206ENST00000428313 WDR59Q6PJI9 974 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 LRIG3Q6UXM1 1119 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 NOSTRINQ8IVI9 506 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 MFN1Q8IWA4 741 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 TBC1D31Q96DN5 1066 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 DBNDD2Q9BQY9 259 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 TMBIM4Q9HC24 238 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 PAG1Q9NWQ8 432 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 IRAK4Q9NWZ3 460 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 BAIAP2L1Q9UHR4 511 aa17.89■□□□□ 0.45
C9orf3-206ENST00000428313 A0A1W2PQC6 194 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 ENO4A6NNW6 628 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 TCP11X2Q5H9J9 407 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 THOC1Q96FV9 657 aaKnown RBP17.88■□□□□ 0.45
C9orf3-206ENST00000428313 LACRTQ9GZZ8 138 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 VPS16Q9H269 839 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 NOP53Q9NZM5 478 aaKnown RBP17.88■□□□□ 0.45
C9orf3-206ENST00000428313 SLC12A6Q9UHW9 1150 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 UBR1Q8IWV7 1749 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 ANP32DO95626 131 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 GRIN1Q05586 938 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-206ENST00000428313 WHAMMQ8TF30 809 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 L3MBTL3Q96JM7 780 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-206ENST00000428313 HINFPQ9BQA5 517 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 PLCD4Q9BRC7 762 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 RWDD2AQ9UIY3 292 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 CTNND2Q9UQB3 1225 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 HYOU1Q9Y4L1 999 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 TMEM2Q9UHN6 1383 aa17.88■□□□□ 0.45
C9orf3-206ENST00000428313 GOLGA6L10A6NI86 522 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 TACC1O75410 805 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 BLMHQ13867 455 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 RILPL1Q5EBL4 403 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 GKAP1Q5VSY0 366 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-206ENST00000428313 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 TAB2Q9NYJ8 693 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 TFR2Q9UP52 801 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 RCCD1A6NED2 376 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 CFAP73A6NFT4 308 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 KCNJ18B7U540 433 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 RNF113AO15541 343 aaKnown RBP17.87■□□□□ 0.45
C9orf3-206ENST00000428313 METAP2P50579 478 aaKnown RBP eCLIP17.87■□□□□ 0.45
C9orf3-206ENST00000428313 KIF5AQ12840 1032 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 DPYDQ12882 1025 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 KCNJ12Q14500 433 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 QPCTQ16769 361 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 HIBCHQ6NVY1 386 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-206ENST00000428313 CCDC155Q8N6L0 562 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 SENP2Q9HC62 589 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 POLD4Q9HCU8 107 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 CEP131Q9UPN4 1083 aa17.87■□□□□ 0.45
C9orf3-206ENST00000428313 STK36Q9NRP7 1315 aa17.86■□□□□ 0.45
C9orf3-206ENST00000428313 RTN3O95197 1032 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-206ENST00000428313 LUC7L3O95232 432 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms