RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 RUFY2Q8WXA3 655 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 TMEM47Q9BQJ4 181 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.16
SNX3-204ENST00000426155 FLRT1Q9NZU1 646 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 IVNS1ABPQ9Y6Y0 642 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 PDE4DIPQ5VU43 2346 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 SLC15A5A6NIM6 579 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
SNX3-204ENST00000426155 ADORA2AP29274 412 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 SHCBP1Q8NEM2 672 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 ESR2Q92731 530 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 GMCL1Q96IK5 515 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
SNX3-204ENST00000426155 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 CYP21A2P08686 494 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 PCP11498 1178 aaKnown RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 XRCC5P13010 732 aaKnown RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 STAT3P40763 770 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 SNAP25P60880 206 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 IKQ13123 557 aaPredicted RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 PPP4R3BQ5MIZ7 849 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 SNRNP48Q6IEG0 339 aaKnown RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 CPXCR1Q8N123 301 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 PRPF38AQ8NAV1 312 aaKnown RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNX3-204ENST00000426155 RAVER2Q9HCJ3 691 aaKnown RBP16.06■□□□□ 0.16
SNX3-204ENST00000426155 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 FEM1BQ9UK73 627 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 RIPK3Q9Y572 518 aa16.06■□□□□ 0.16
SNX3-204ENST00000426155 COBLO75128 1261 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 GJB1P08034 283 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
SNX3-204ENST00000426155 TAL1P17542 331 aaPredicted RBP16.05■□□□□ 0.16
SNX3-204ENST00000426155 STAT2P52630 851 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 BMP2KLQ5H9B9 411 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 RIOX2Q8IUF8 465 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 U2AF1L4Q8WU68 220 aaKnown RBP16.05■□□□□ 0.16
SNX3-204ENST00000426155 DEFB118Q96PH6 123 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 MROH8Q9H579 483 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 SLC38A10Q9HBR0 1119 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 PAK6Q9NQU5 681 aaPredicted RBP16.05■□□□□ 0.16
SNX3-204ENST00000426155 MCM3APO60318 1980 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 LCTP09848 1927 aa16.05■□□□□ 0.16
SNX3-204ENST00000426155 TNKSO95271 1327 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 PGK2P07205 417 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 GJA8P48165 433 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 CACNB2Q08289 660 aaPredicted RBP16.04■□□□□ 0.16
SNX3-204ENST00000426155 MAP3K21Q5TCX8 1036 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 ESYT1Q9BSJ8 1104 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 TEX13BQ9BXU2 312 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 ZSWIM5Q9P217 1185 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 RBM8AQ9Y5S9 174 aaKnown RBP16.04■□□□□ 0.16
SNX3-204ENST00000426155 MYH6P13533 1939 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 ALPK3Q96L96 1907 aa16.04■□□□□ 0.16
SNX3-204ENST00000426155 ZNF536O15090 1300 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 ZBED4O75132 1171 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 SLC25A27O95847 323 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 HOXC6P09630 235 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 PDHBP11177 359 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
SNX3-204ENST00000426155 CYP2C19P33261 490 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 SLC16A2P36021 539 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 DPP9Q86TI2 863 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 DCAF4Q8WV16 495 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 MMP19Q99542 508 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 LSG1Q9H089 658 aaKnown RBP16.03■□□□□ 0.16
SNX3-204ENST00000426155 GPCPD1Q9NPB8 672 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 PRR12Q9ULL5 1215 aa16.03■□□□□ 0.16
SNX3-204ENST00000426155 RPTORQ8N122 1335 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 STRNO43815 780 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 SGPL1O95470 568 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 FCER1AP12319 257 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 CCDC174Q6PII3 467 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 FAM160B2Q86V87 743 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 IQCA1Q86XH1 822 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 ENAHQ8N8S7 591 aaPredicted RBP16.02■□□□□ 0.16
SNX3-204ENST00000426155 MAP4K1Q92918 833 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 AGBL1Q96MI9 1066 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.16
SNX3-204ENST00000426155 KRT23Q9C075 422 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 HMX1Q9NP08 348 aaPredicted RBP16.02■□□□□ 0.16
SNX3-204ENST00000426155 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.16
SNX3-204ENST00000426155 CTDP1Q9Y5B0 961 aaPredicted RBP16.02■□□□□ 0.16
SNX3-204ENST00000426155 E7EWF7 191 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 GOLGA8HP0CJ92 632 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
SNX3-204ENST00000426155 DGKHQ86XP1 1220 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 TRMT44Q8IYL2 757 aaKnown RBP16.01■□□□□ 0.15
SNX3-204ENST00000426155 ABRAQ8N0Z2 381 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 PNMA1Q8ND90 353 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 CHURC1Q8WUH1 139 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 TTC14Q96N46 770 aa16.01■□□□□ 0.15
SNX3-204ENST00000426155 CPVLQ9H3G5 476 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms