RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 F13A1P00488 732 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 VCAM1P19320 739 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 PPATQ06203 517 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 SYDE2Q5VT97 1194 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 GPKOWQ92917 476 aaPredicted RBP eCLIP18.23■□□□□ 0.51
SCRN1-205ENST00000425819 TNPO1Q92973 898 aaKnown RBP18.23■□□□□ 0.51
SCRN1-205ENST00000425819 KCNJ14Q9UNX9 436 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 STAT2P52630 851 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 SNAP25P60880 206 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 FKBP1BP68106 108 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 CST9Q5W186 159 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 MCTP1Q6DN14 999 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
SCRN1-205ENST00000425819 BTNL9Q6UXG8 535 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 HEATR3Q7Z4Q2 680 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 SHISA4Q96DD7 197 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 SLC10A4Q96EP9 437 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
SCRN1-205ENST00000425819 IRF6O14896 467 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 XBP1P17861 261 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 WWC2Q6AWC2 1192 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 RBM46Q8TBY0 533 aaKnown RBP18.21■□□□□ 0.51
SCRN1-205ENST00000425819 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 OPTNQ96CV9 577 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 TANGO6Q9C0B7 1094 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 RPAP3Q9H6T3 665 aaPredicted RBP18.21■□□□□ 0.51
SCRN1-205ENST00000425819 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 PRR12Q9ULL5 1215 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 BAZ2BQ9UIF8 2168 aaKnown RBP18.21■□□□□ 0.51
SCRN1-205ENST00000425819 PHIPQ8WWQ0 1821 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 CDC37Q16543 378 aaPredicted RBP18.21■□□□□ 0.51
SCRN1-205ENST00000425819 FOXD4L6Q3SYB3 417 aaPredicted RBP18.21■□□□□ 0.51
SCRN1-205ENST00000425819 FOXD4L3Q6VB84 417 aaPredicted RBP18.21■□□□□ 0.51
SCRN1-205ENST00000425819 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 MTMR8Q96EF0 704 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 C12orf42Q96LP6 360 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 FEM1BQ9UK73 627 aa18.21■□□□□ 0.51
SCRN1-205ENST00000425819 PNMA6FA0A0J9YX94 578 aa18.2■□□□□ 0.5
SCRN1-205ENST00000425819 ZBTB5O15062 677 aa18.2■□□□□ 0.5
SCRN1-205ENST00000425819 PPIL2Q13356 520 aa18.2■□□□□ 0.5
SCRN1-205ENST00000425819 QRICH1Q2TAL8 776 aa18.2■□□□□ 0.5
SCRN1-205ENST00000425819 SH3D19Q5HYK7 790 aa18.2■□□□□ 0.5
SCRN1-205ENST00000425819 UNCXA6NJT0 531 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 STXBP3O00186 592 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 PLA2G6O60733 806 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-205ENST00000425819 MMP1P03956 469 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 RESTQ13127 1097 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 TYW1BQ6NUM6 668 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 CHAMP1Q96JM3 812 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 PHF20Q9BVI0 1012 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
SCRN1-205ENST00000425819 CXCL11O14625 94 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 FLOT1O75955 427 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 GJA5P36382 358 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 NLRP5P59047 1200 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 GADL1Q6ZQY3 521 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 RGS22Q8NE09 1264 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 COA7Q96BR5 231 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 SLF1Q9BQI6 1058 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 SH3GLB2Q9NR46 395 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 MYH6P13533 1939 aa18.18■□□□□ 0.5
SCRN1-205ENST00000425819 A0A0G2JLL6 359 aaPredicted RBP18.17■□□□□ 0.5
SCRN1-205ENST00000425819 KIF28PB7ZC32 967 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 NAPAP54920 295 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 KIF23Q02241 960 aaPredicted RBP18.17■□□□□ 0.5
SCRN1-205ENST00000425819 GNL2Q13823 731 aaKnown RBP18.17■□□□□ 0.5
SCRN1-205ENST00000425819 SAFBQ15424 915 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCRN1-205ENST00000425819 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 PRRT2Q7Z6L0 340 aaPredicted RBP18.17■□□□□ 0.5
SCRN1-205ENST00000425819 DIS3L2Q8IYB7 885 aaKnown RBP18.17■□□□□ 0.5
SCRN1-205ENST00000425819 KCNH4Q9UQ05 1017 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 PASKQ96RG2 1323 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 YY1P25490 414 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 CCDC174Q6PII3 467 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 OXER1Q8TDS5 423 aa18.17■□□□□ 0.5
SCRN1-205ENST00000425819 ZSCAN16Q9H4T2 348 aaPredicted RBP18.17■□□□□ 0.5
SCRN1-205ENST00000425819 BTBD18B2RXH4 712 aa18.16■□□□□ 0.5
SCRN1-205ENST00000425819 hCG_1984214I3L0E3 225 aa18.16■□□□□ 0.5
SCRN1-205ENST00000425819 HUNKP57058 714 aa18.16■□□□□ 0.5
SCRN1-205ENST00000425819 MKRN3Q13064 507 aaKnown RBP18.16■□□□□ 0.5
SCRN1-205ENST00000425819 TREML2Q5T2D2 321 aa18.16■□□□□ 0.5
SCRN1-205ENST00000425819 ZNF713Q8N859 430 aaPredicted RBP18.16■□□□□ 0.5
SCRN1-205ENST00000425819 PRPF38AQ8NAV1 312 aaKnown RBP18.16■□□□□ 0.5
SCRN1-205ENST00000425819 WNK4Q96J92 1243 aa18.16■□□□□ 0.5
SCRN1-205ENST00000425819 RANBP17Q9H2T7 1088 aaKnown RBP18.16■□□□□ 0.5
SCRN1-205ENST00000425819 PPP1R9AQ9ULJ8 1098 aa18.16■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
SCRN1-205ENST00000425819 TAL1P17542 331 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms