RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 SCN9AQ15858 1988 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 TERTO14746 1132 aaKnown RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 TLR2O60603 784 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 LDHBP07195 334 aaKnown RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 CT47B1P0C2W7 299 aaPredicted RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 NBPF7P0C2Y1 421 aaPredicted RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 NOS2P35228 1153 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 RBM25P49756 843 aaKnown RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 PPIL2Q13356 520 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 RABL6Q3YEC7 729 aaPredicted RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 FASTKD5Q7L8L6 764 aaKnown RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS8-205ENST00000424721 FAM151AQ8WW52 585 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 SUCLG2Q96I99 432 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 WRNIP1Q96S55 665 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 PTPN18Q99952 460 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 MKNK1Q9BUB5 465 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 C2orf49Q9BVC5 232 aaPredicted RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 PUS3Q9BZE2 481 aaKnown RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 TMEM39BQ9GZU3 492 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 BICC1Q9H694 974 aaKnown RBP6.61□□□□□ -1.35
VPS8-205ENST00000424721 ZDHHC3Q9NYG2 299 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 DENND2AQ9ULE3 1009 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 FZD1Q9UP38 647 aa6.61□□□□□ -1.35
VPS8-205ENST00000424721 CACNA1FO60840 1977 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 A0A1B0GTH6 734 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 EYA2O00167 538 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 EML1O00423 815 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 CXCL11O14625 94 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 UBTFL1P0CB47 393 aaPredicted RBP6.6□□□□□ -1.35
VPS8-205ENST00000424721 UBXN2AP68543 259 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 VGLL4Q14135 290 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 LRRC24Q50LG9 513 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 FOXD4L4Q8WXT5 416 aaPredicted RBP6.6□□□□□ -1.35
VPS8-205ENST00000424721 TEPSINQ96N21 525 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 GAS2L1Q99501 681 aaPredicted RBP6.6□□□□□ -1.35
VPS8-205ENST00000424721 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 BIN2Q9UBW5 565 aaPredicted RBP6.6□□□□□ -1.35
VPS8-205ENST00000424721 GNEQ9Y223 722 aaKnown RBP6.6□□□□□ -1.35
VPS8-205ENST00000424721 AKAP2Q9Y2D5 859 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 DYRK1BQ9Y463 629 aa6.6□□□□□ -1.35
VPS8-205ENST00000424721 MYH3P11055 1940 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 IPO8O15397 1037 aaKnown RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 CIAO1O76071 339 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 MAP4K4O95819 1239 aaPredicted RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 LDHCP07864 332 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 IL15P40933 162 aaPredicted RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 HIF1AQ16665 826 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 PHLDB3Q6NSJ2 640 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 APOBEC3HQ6NTF7 200 aaKnown RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 ANKRD23Q86SG2 305 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 ZSCAN29Q8IWY8 852 aaPredicted RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 NPAS3Q8IXF0 933 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 ZNF295-AS1Q8N0V1 137 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 RAET1EQ8TD07 263 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 BRI3BPQ8WY22 251 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 API5Q9BZZ5 524 aaKnown RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 USP44Q9H0E7 712 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 GPAMQ9HCL2 828 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 USP40Q9NVE5 1235 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 PCDHAC2Q9Y5I4 1007 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 LRRFIP2Q9Y608 721 aaKnown RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 GPC6Q9Y625 555 aaPredicted RBP6.59□□□□□ -1.35
VPS8-205ENST00000424721 PSME4Q14997 1843 aa6.59□□□□□ -1.35
VPS8-205ENST00000424721 BTBD19C9JJ37 291 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 H3BM21 787 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 PDHXO00330 501 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 ENTPD3O75355 529 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 GNAI3P08754 354 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 EN2P19622 333 aaPredicted RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 FGFR2P21802 821 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 PSMC4P43686 418 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 GSTO1P78417 241 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 LACTBP83111 547 aaPredicted RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 NFX1Q12986 1120 aaKnown RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 PABPC4Q13310 644 aaKnown RBP eCLIP6.58□□□□□ -1.36
VPS8-205ENST00000424721 ATP2B3Q16720 1220 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 HABP4Q5JVS0 413 aaKnown RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 GORABQ5T7V8 394 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 RIPOR1Q6ZS17 1223 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 MIGA2Q7L4E1 593 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 ZDHHC1Q8WTX9 485 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 DPF3Q92784 378 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 ZKSCAN4Q969J2 545 aaPredicted RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 KAZALD1Q96I82 304 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 ZNF333Q96JL9 665 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 PARK7Q99497 189 aaKnown RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 NOL10Q9BSC4 688 aaKnown RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 HTATIP2Q9BUP3 242 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 SMC4Q9NTJ3 1288 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 CUEDC1Q9NWM3 386 aaPredicted RBP6.58□□□□□ -1.36
VPS8-205ENST00000424721 ZNF112Q9UJU3 913 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 NR2E3Q9Y5X4 410 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 IVNS1ABPQ9Y6Y0 642 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 COL4A1P02462 1669 aa6.58□□□□□ -1.36
VPS8-205ENST00000424721 CDC14CA4D256 554 aa6.57□□□□□ -1.36
VPS8-205ENST00000424721 CTNND1O60716 968 aaKnown RBP6.57□□□□□ -1.36
VPS8-205ENST00000424721 IGSF3O75054 1194 aa6.57□□□□□ -1.36
VPS8-205ENST00000424721 WFS1O76024 890 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms