RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 FAM173BQ6P4H8 233 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 GADL1Q6ZQY3 521 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 FAM193BQ96PV7 902 aaPredicted RBP12.2□□□□□ -0.46
TNC-203ENST00000423613 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
TNC-203ENST00000423613 DENND2AQ9ULE3 1009 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 G3BP2Q9UN86 482 aaKnown RBP12.2□□□□□ -0.46
TNC-203ENST00000423613 MAPK8IP1Q9UQF2 711 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 NR1I2O75469 434 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 PDHA1P08559 390 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 CCDC197Q8NCU1 140 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
TNC-203ENST00000423613 UHMK1Q8TAS1 419 aaKnown RBP12.2□□□□□ -0.46
TNC-203ENST00000423613 TESK2Q96S53 571 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 USP21Q9UK80 565 aa12.2□□□□□ -0.46
TNC-203ENST00000423613 STK25O00506 426 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 KIF1CO43896 1103 aaKnown RBP12.19□□□□□ -0.46
TNC-203ENST00000423613 USH1GQ495M9 461 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 FAM89AQ96GI7 184 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 TMEM87BQ96K49 555 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 DBNDD2Q9BQY9 259 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 KRT82Q9NSB4 513 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 EYA2O00167 538 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 DTNBO60941 627 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 TTC4O95801 387 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 S100BP04271 92 aaPredicted RBP12.19□□□□□ -0.46
TNC-203ENST00000423613 FANCCQ00597 558 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 OTUD7BQ6GQQ9 843 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
TNC-203ENST00000423613 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
TNC-203ENST00000423613 KCNA4P22459 653 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 HP1BP3Q5SSJ5 553 aaPredicted RBP12.19□□□□□ -0.46
TNC-203ENST00000423613 LGSNQ5TDP6 509 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 NSMFQ6X4W1 530 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 CAPN12Q6ZSI9 719 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 MED10Q9BTT4 135 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 CBX8Q9HC52 389 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 GIMAP4Q9NUV9 329 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 SYNRGQ9UMZ2 1314 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 ITGA6P23229 1130 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 TRIM14Q14142 442 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 GNPTABQ3T906 1256 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 PPWD1Q96BP3 646 aaKnown RBP12.19□□□□□ -0.46
TNC-203ENST00000423613 DDX28Q9NUL7 540 aaKnown RBP12.19□□□□□ -0.46
TNC-203ENST00000423613 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 A2MP01023 1474 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 ARHGAP44Q17R89 818 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 MAP7D3Q8IWC1 876 aa12.19□□□□□ -0.46
TNC-203ENST00000423613 CCNT1O60563 726 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 PPP1R2P41236 205 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 TMEM259Q4ZIN3 620 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 SRGAP1Q7Z6B7 1085 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 CTAGE3PQ8IX95 158 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 TRIML2Q8N7C3 387 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 USTQ9Y2C2 406 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 V9GY48 417 aaPredicted RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 POLR2DO15514 142 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 IFRD2Q12894 506 aaPredicted RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 CNNM4Q6P4Q7 775 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 HACE1Q8IYU2 909 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 PRPF38AQ8NAV1 312 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 PPIP5K2O43314 1243 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 SKIP12755 728 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 MTX1Q13505 466 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 METTL13Q8N6R0 699 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 DCPSQ96C86 337 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 LLPHQ9BRT6 129 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 DBNLQ9UJU6 430 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 PCDH11XQ9BZA7 1347 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 PCDH11YQ9BZA8 1340 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 GCP02774 474 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 KRT80Q6KB66 452 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 TTLL11Q8NHH1 800 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 XAGE2Q96GT9 111 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 GNGT2O14610 69 aa12.18□□□□□ -0.46
TNC-203ENST00000423613 SART1O43290 800 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 STK10O94804 968 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 PRPF6O94906 941 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 HIBADHP31937 336 aaKnown RBP12.18□□□□□ -0.46
TNC-203ENST00000423613 HNRNPCL2B2RXH8 293 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 HNRNPCL1O60812 293 aaKnown RBP12.17□□□□□ -0.46
TNC-203ENST00000423613 KRT75O95678 551 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 HNRNPH2P55795 449 aaKnown RBP12.17□□□□□ -0.46
TNC-203ENST00000423613 MRPS15P82914 257 aaKnown RBP12.17□□□□□ -0.46
TNC-203ENST00000423613 DAB2P98082 770 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 LONRF2Q1L5Z9 754 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 VWA3BQ502W6 1294 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 ARMCX6Q7L4S7 300 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 ZC3H18Q86VM9 953 aaKnown RBP12.17□□□□□ -0.46
TNC-203ENST00000423613 DAAM1Q9Y4D1 1078 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 CD2APQ9Y5K6 639 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
TNC-203ENST00000423613 CSGALNACT2Q8N6G5 542 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms