RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 P2RX7Q99572 595 aaKnown RBP19.82■□□□□ 0.76
COL7A1-202ENST00000422991 LARP6Q9BRS8 491 aaKnown RBP19.82■□□□□ 0.76
COL7A1-202ENST00000422991 HPS5Q9UPZ3 1129 aa19.82■□□□□ 0.76
COL7A1-202ENST00000422991 GOLGA8AA7E2F4 631 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 DSG3P32926 999 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 KIF5BP33176 963 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 CRHR2Q13324 411 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 COG2Q14746 738 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 LBX2Q6XYB7 198 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 CTCFLQ8NI51 663 aaPredicted RBP19.81■□□□□ 0.76
COL7A1-202ENST00000422991 CHURC1Q8WUH1 139 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 CFHR5Q9BXR6 569 aa19.81■□□□□ 0.76
COL7A1-202ENST00000422991 NAP1L2Q9ULW6 460 aaPredicted RBP19.81■□□□□ 0.76
COL7A1-202ENST00000422991 PDIA3P30101 505 aaKnown RBP19.8■□□□□ 0.76
COL7A1-202ENST00000422991 IKQ13123 557 aaPredicted RBP19.8■□□□□ 0.76
COL7A1-202ENST00000422991 POTEEQ6S8J3 1075 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 CCDC144CPQ8IYA2 1237 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 PRPF38AQ8NAV1 312 aaKnown RBP19.8■□□□□ 0.76
COL7A1-202ENST00000422991 FANCBQ8NB91 859 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 SMCR8Q8TEV9 937 aaPredicted RBP19.8■□□□□ 0.76
COL7A1-202ENST00000422991 ATG4CQ96DT6 458 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 ZNF274Q96GC6 653 aaPredicted RBP19.8■□□□□ 0.76
COL7A1-202ENST00000422991 ZFYVE28Q9HCC9 887 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 HOXC10Q9NYD6 342 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 TPCN1Q9ULQ1 816 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 ADAMTS5Q9UNA0 930 aa19.8■□□□□ 0.76
COL7A1-202ENST00000422991 KLRF2D3W0D1 207 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 ST18O60284 1047 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 SLC16A2P36021 539 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL7A1-202ENST00000422991 RTN1Q16799 776 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 SYDE2Q5VT97 1194 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 SAMD1Q6SPF0 538 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-202ENST00000422991 NOL8Q76FK4 1167 aaKnown RBP19.79■□□□□ 0.76
COL7A1-202ENST00000422991 GTF3C2Q8WUA4 911 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-202ENST00000422991 KIFC2Q96AC6 838 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 CPVLQ9H3G5 476 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 PRR12Q9ULL5 1215 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 CASP8AP2Q9UKL3 1982 aa19.79■□□□□ 0.76
COL7A1-202ENST00000422991 TLR2O60603 784 aa19.78■□□□□ 0.76
COL7A1-202ENST00000422991 GCLCP48506 637 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-202ENST00000422991 SLC35G1Q2M3R5 365 aa19.78■□□□□ 0.76
COL7A1-202ENST00000422991 TMTC3Q6ZXV5 915 aa19.78■□□□□ 0.76
COL7A1-202ENST00000422991 R3HDMLQ9H3Y0 253 aa19.78■□□□□ 0.76
COL7A1-202ENST00000422991 FAM217BQ9NTX9 383 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-202ENST00000422991 RBM28Q9NW13 759 aaKnown RBP19.78■□□□□ 0.76
COL7A1-202ENST00000422991 MYH6P13533 1939 aa19.78■□□□□ 0.76
COL7A1-202ENST00000422991 VWA5AO00534 786 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 PLEKHA8P1O95397 391 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 CDC27P30260 824 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 GNAQP50148 359 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 PPP2R5BQ15173 497 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 MB21D1Q8N884 522 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 REPS2Q8NFH8 660 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 LZTS2Q9BRK4 669 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 UBA5Q9GZZ9 404 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 LIMCH1Q9UPQ0 1083 aa19.77■□□□□ 0.76
COL7A1-202ENST00000422991 BAZ2BQ9UIF8 2168 aaKnown RBP19.76■□□□□ 0.75
COL7A1-202ENST00000422991 PFKFB2O60825 505 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 CNMDO75829 334 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 CD2BP2O95400 341 aaKnown RBP19.76■□□□□ 0.75
COL7A1-202ENST00000422991 LARGE1O95461 756 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 TBC1D8O95759 1140 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 FDX1P10109 184 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 BCRP11274 1271 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 NBPF11Q86T75 865 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 ADGRF4Q8IZF3 695 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 SPZ1Q9BXG8 430 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 RANBP17Q9H2T7 1088 aaKnown RBP19.76■□□□□ 0.75
COL7A1-202ENST00000422991 SLC38A10Q9HBR0 1119 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 NCOA5Q9HCD5 579 aaKnown RBP19.76■□□□□ 0.75
COL7A1-202ENST00000422991 TXNRD2Q9NNW7 524 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 RBPJLQ9UBG7 517 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 MORF4L1Q9UBU8 362 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 RABGAP1Q9Y3P9 1069 aa19.76■□□□□ 0.75
COL7A1-202ENST00000422991 CCDC196A0A1B0GTZ2 297 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 CYTH3O43739 400 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 STK3Q13188 491 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 ME3Q16798 604 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 FAM110CQ1W6H9 321 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 C17orf99Q6UX52 265 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 SRBD1Q8N5C6 995 aaKnown RBP19.75■□□□□ 0.75
COL7A1-202ENST00000422991 PAGR1Q9BTK6 254 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 RIOX1Q9H6W3 641 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 JMJD4Q9H9V9 463 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 BTBD7Q9P203 1132 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 CPA4Q9UI42 421 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 CNTNAP5Q8WYK1 1306 aa19.75■□□□□ 0.75
COL7A1-202ENST00000422991 PEX10O60683 326 aa19.74■□□□□ 0.75
COL7A1-202ENST00000422991 ZBED4O75132 1171 aa19.74■□□□□ 0.75
COL7A1-202ENST00000422991 SMARCA1P28370 1054 aa19.74■□□□□ 0.75
COL7A1-202ENST00000422991 ADD1P35611 737 aaKnown RBP19.74■□□□□ 0.75
COL7A1-202ENST00000422991 CCT2P78371 535 aaKnown RBP19.74■□□□□ 0.75
COL7A1-202ENST00000422991 FUT2Q10981 343 aa19.74■□□□□ 0.75
COL7A1-202ENST00000422991 TMEM132BQ14DG7 1078 aa19.74■□□□□ 0.75
COL7A1-202ENST00000422991 CMTR1Q8N1G2 835 aaKnown RBP19.74■□□□□ 0.75
COL7A1-202ENST00000422991 ANKRD13CQ8N6S4 541 aa19.74■□□□□ 0.75
COL7A1-202ENST00000422991 MTMR8Q96EF0 704 aa19.74■□□□□ 0.75
COL7A1-202ENST00000422991 SLKQ9H2G2 1235 aaPredicted RBP19.74■□□□□ 0.75
COL7A1-202ENST00000422991 ZNF214Q9UL59 606 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms