RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 KANSL2Q9H9L4 492 aa6.82□□□□□ -1.32
VPS8-202ENST00000421069 GPATCH2Q9NW75 528 aa6.82□□□□□ -1.32
VPS8-202ENST00000421069 PIM2Q9P1W9 311 aa6.82□□□□□ -1.32
VPS8-202ENST00000421069 SF3B6Q9Y3B4 125 aaKnown RBP6.82□□□□□ -1.32
VPS8-202ENST00000421069 ST14Q9Y5Y6 855 aa6.82□□□□□ -1.32
VPS8-202ENST00000421069 PTCH2Q9Y6C5 1203 aa6.82□□□□□ -1.32
VPS8-202ENST00000421069 TRAV20A0A0B4J274 112 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 ESYT3A0FGR9 886 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 CDC45O75419 566 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 CEACAM5P06731 702 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 CLCN7P51798 805 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 PPP2R2AP63151 447 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 CLEC16AQ2KHT3 1053 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 SPACA3Q8IXA5 215 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 SYNPOQ8N3V7 929 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
VPS8-202ENST00000421069 FAM181AQ8N9Y4 354 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 ADCY4Q8NFM4 1077 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 AARSD1Q9BTE6 412 aaKnown RBP6.81□□□□□ -1.32
VPS8-202ENST00000421069 DSCC1Q9BVC3 393 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 NOL6Q9H6R4 1146 aaKnown RBP6.81□□□□□ -1.32
VPS8-202ENST00000421069 ARHGEF4Q9NR80 690 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 FANCLQ9NW38 375 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 SNX11Q9Y5W9 270 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 U3KQE9 123 aa6.81□□□□□ -1.32
VPS8-202ENST00000421069 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 PRR19A6NJB7 356 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 CYP26A1O43174 497 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 GSNP06396 782 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 FGFR1P11362 822 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 FOSL1P15407 271 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 C16orf86Q6ZW13 317 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 NETO1Q8TDF5 533 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 LRRC4CQ9HCJ2 640 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 PLAGL2Q9UPG8 496 aa6.8□□□□□ -1.32
VPS8-202ENST00000421069 TMEM265A0A087WTH1 108 aa6.79□□□□□ -1.32
VPS8-202ENST00000421069 RBAK-RBAKDNI3L0D1 243 aa6.79□□□□□ -1.32
VPS8-202ENST00000421069 ITIH2P19823 946 aa6.79□□□□□ -1.32
VPS8-202ENST00000421069 POU4F1Q01851 419 aa6.79□□□□□ -1.32
VPS8-202ENST00000421069 PPP2R5DQ14738 602 aa6.79□□□□□ -1.32
VPS8-202ENST00000421069 IFI16Q16666 785 aaKnown RBP6.79□□□□□ -1.32
VPS8-202ENST00000421069 TSPYL5Q86VY4 417 aaPredicted RBP6.79□□□□□ -1.32
VPS8-202ENST00000421069 SCUBE1Q8IWY4 988 aa6.79□□□□□ -1.32
VPS8-202ENST00000421069 H0Y8X5 98 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 KCNH1O95259 989 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 HOXC12P31275 282 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 BMP8BP34820 402 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 AMPD2Q01433 879 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 TCEA2Q15560 299 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 CDKAL1Q5VV42 579 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 CWF19L1Q69YN2 538 aaKnown RBP6.78□□□□□ -1.32
VPS8-202ENST00000421069 GTF2IRD2BQ6EKJ0 949 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 KIAA0907Q7Z7F0 614 aaPredicted RBP6.78□□□□□ -1.32
VPS8-202ENST00000421069 GTF2IRD2Q86UP8 949 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 KISS1RQ969F8 398 aaPredicted RBP6.78□□□□□ -1.32
VPS8-202ENST00000421069 HSPA12BQ96MM6 686 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 ZDHHC15Q96MV8 337 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 IPO9Q96P70 1041 aaKnown RBP6.78□□□□□ -1.32
VPS8-202ENST00000421069 CDC6Q99741 560 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 DHRS4Q9BTZ2 278 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 LGR4Q9BXB1 951 aa6.78□□□□□ -1.32
VPS8-202ENST00000421069 DNAJC25-GNG10A0A024R161 153 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 TRBV23-1A0A0A0MS06 115 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 TBX1O43435 398 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 SCG5P05408 212 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 PABPC1P11940 636 aaKnown RBP6.77□□□□□ -1.33
VPS8-202ENST00000421069 CTSKP43235 329 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 NOP2P46087 812 aaKnown RBP6.77□□□□□ -1.33
VPS8-202ENST00000421069 GAB4Q2WGN9 574 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 TMPRSS7Q7RTY8 843 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 BTN2A2Q8WVV5 523 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 TCTN2Q96GX1 697 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 NKX2-4Q9H2Z4 354 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 CYP26B1Q9NR63 512 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 SEMA3GQ9NS98 782 aa6.77□□□□□ -1.33
VPS8-202ENST00000421069 ZC3H7BQ9UGR2 993 aaKnown RBP6.77□□□□□ -1.33
VPS8-202ENST00000421069 PITPNM2Q9BZ72 1349 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 H3BS24 57 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 PRODHO43272 600 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 TPP2P29144 1249 aaPredicted RBP6.76□□□□□ -1.33
VPS8-202ENST00000421069 MAP4K2Q12851 820 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 FOXB2Q5VYV0 432 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 NSMFQ6X4W1 530 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 PLD6Q8N2A8 252 aaKnown RBP6.76□□□□□ -1.33
VPS8-202ENST00000421069 UBE2FQ969M7 185 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 OSBP2Q969R2 916 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 EXOC2Q96KP1 924 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 FEZ1Q99689 392 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 TMX1Q9H3N1 280 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 ZSWIM5Q9P217 1185 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 MINPP1Q9UNW1 487 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 SBNO2Q9Y2G9 1366 aa6.76□□□□□ -1.33
VPS8-202ENST00000421069 MEIS1O00470 390 aa6.75□□□□□ -1.33
VPS8-202ENST00000421069 VAMP4O75379 141 aa6.75□□□□□ -1.33
VPS8-202ENST00000421069 CPP00450 1065 aa6.75□□□□□ -1.33
VPS8-202ENST00000421069 VAV1P15498 845 aa6.75□□□□□ -1.33
VPS8-202ENST00000421069 ENDOUP21128 410 aaKnown RBP6.75□□□□□ -1.33
VPS8-202ENST00000421069 L1CAMP32004 1257 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms