RNA–Protein interactions for RNA: ENST00000420451.5

HDLBP-207, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-207ENST00000420451 KCTD2Q14681 263 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 SHHQ15465 462 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-207ENST00000420451 MAMDC4Q6UXC1 1216 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 SH3RF1Q7Z6J0 888 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 CHD1LQ86WJ1 897 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 MSL3Q8N5Y2 521 aaKnown RBP12.75□□□□□ -0.37
HDLBP-207ENST00000420451 MKL1Q969V6 931 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 TRIM43Q96BQ3 446 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-207ENST00000420451 GUCD1Q96NT3 240 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 PLIN4Q96Q06 1357 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 NUP88Q99567 741 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-207ENST00000420451 SLF1Q9BQI6 1058 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 TEX13BQ9BXU2 312 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 PRKAG2Q9UGJ0 569 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 SYNPO2Q9UMS6 1093 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 RIPK3Q9Y572 518 aa12.75□□□□□ -0.37
HDLBP-207ENST00000420451 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 RNF113AO15541 343 aaKnown RBP12.74□□□□□ -0.37
HDLBP-207ENST00000420451 GPAA1O43292 621 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-207ENST00000420451 RARBP10826 455 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 AKR1A1P14550 325 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 ITGB8P26012 769 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 PDE4AP27815 886 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 C9orf50Q5SZB4 431 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 SKAP1Q86WV1 359 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 PRPF38AQ8NAV1 312 aaKnown RBP12.74□□□□□ -0.37
HDLBP-207ENST00000420451 BADQ92934 168 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 FERMT2Q96AC1 680 aa12.74□□□□□ -0.37
HDLBP-207ENST00000420451 A0A1W2PQ45 241 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-207ENST00000420451 A0A1W2PQY0 241 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 MINDY4BA8MYZ0 360 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 M0R2C6 588 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 SNAI1O95863 264 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-207ENST00000420451 PGK1P00558 417 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 GNAT2P19087 354 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 TLE2Q04725 743 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 SNRNP48Q6IEG0 339 aaKnown RBP12.73□□□□□ -0.37
HDLBP-207ENST00000420451 CCSAPQ6IQ19 270 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-207ENST00000420451 ZNF467Q7Z7K2 595 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-207ENST00000420451 RNF180Q86T96 592 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 KLHDC9Q8NEP7 349 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 CEP95Q96GE4 821 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 FGD4Q96M96 766 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 MTMR4Q9NYA4 1195 aa12.73□□□□□ -0.37
HDLBP-207ENST00000420451 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-207ENST00000420451 TTC41PQ6P2S7 1318 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 SYNRGQ9UMZ2 1314 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
HDLBP-207ENST00000420451 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-207ENST00000420451 IFNL3Q8IZI9 196 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 PI4K2BQ8TCG2 481 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-207ENST00000420451 TSEN34Q9BSV6 310 aaKnown RBP12.72□□□□□ -0.37
HDLBP-207ENST00000420451 PRDM5Q9NQX1 630 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-207ENST00000420451 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 TACC3Q9Y6A5 838 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 SPTBN5Q9NRC6 3674 aaKnown RBP12.72□□□□□ -0.37
HDLBP-207ENST00000420451 LCTP09848 1927 aa12.72□□□□□ -0.37
HDLBP-207ENST00000420451 VCANP13611 3396 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 RAD21O60216 631 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 PRDM1O75626 825 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 CLTBP09497 229 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 MX1P20591 662 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 CST5P28325 142 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-207ENST00000420451 OAZ1P54368 228 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 PDE1AP54750 535 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 SMAD3P84022 425 aaKnown RBP12.71□□□□□ -0.37
HDLBP-207ENST00000420451 ANKRD33Q7Z3H0 272 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-207ENST00000420451 NEDD1Q8NHV4 660 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 GPATCH3Q96I76 525 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
HDLBP-207ENST00000420451 CNPY2Q9Y2B0 182 aa12.71□□□□□ -0.37
HDLBP-207ENST00000420451 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 FOXP2O15409 715 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 ADCY6O43306 1168 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 DUSP11O75319 330 aaKnown RBP12.7□□□□□ -0.38
HDLBP-207ENST00000420451 TTLL1O95922 423 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 TDO2P48775 406 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 ACLYP53396 1101 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 EPHB4P54760 987 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 FAAP100Q0VG06 881 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 FAM161BQ96MY7 647 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 TOX2Q96NM4 488 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 ZNF287Q9HBT7 754 aa12.7□□□□□ -0.38
HDLBP-207ENST00000420451 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms