RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PDS5AQ29RF7 1337 aaKnown RBP13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SPATA31A5Q5VU36 1347 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SPATA31A7Q8IWB4 1347 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PRCPP42785 496 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TUBB4BP68371 445 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 E2F4Q16254 413 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 USP17L3A6NCW0 530 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 USP17L4A6NCW7 530 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 C12orf60Q5U649 245 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 USP17L1Q7RTZ2 530 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ACRBPQ8NEB7 543 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SLF1Q9BQI6 1058 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ST7Q9NRC1 585 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SAP30BPQ9UHR5 308 aaKnown RBP13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 NHSL1Q5SYE7 1610 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 FANCGO15287 622 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CTAGE8P0CG41 777 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 LETM2Q2VYF4 491 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 APTXQ7Z2E3 356 aaKnown RBP13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CTAGE4Q8IX94 777 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 VAT1LQ9HCJ6 419 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 GNA11P29992 359 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RFC4P35249 363 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 AMPD3Q01432 767 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 MAPKAPK5Q8IW41 473 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SLC35F6Q8N357 371 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 OR8K1Q8NGG5 319 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 C6orf50Q9HD87 102 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DUOX1Q9NRD9 1551 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 FAM193AP78312 1265 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 KIAA1328Q86T90 577 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 LAD1O00515 517 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 MYL1P05976 194 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 PBX1P40424 430 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 ASIC1P78348 528 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 GRM4Q14833 912 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CSGALNACT2Q8N6G5 542 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 LRRC10BA6NIK2 292 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 MTIF2P46199 727 aaKnown RBP13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 EPN1Q9Y6I3 576 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 BCL9LQ86UU0 1499 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CCDC151A5D8V7 595 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 BRD3Q15059 726 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 IL17AQ16552 155 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CABP7Q86V35 215 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 FAM114A1Q8IWE2 563 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 FAM205AQ6ZU69 1335 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 BICDL2A1A5D9 508 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 TRIM49BA6NDI0 452 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 KRT25Q7Z3Z0 450 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 BARHL2Q9NY43 387 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 MARCH6O60337 910 aa13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
CSPG4P3Y-201ENST00000418188 PDE4DQ08499 809 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms