RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 RBM43Q6ZSC3 357 aaKnown RBP12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 SIAH1Q8IUQ4 282 aa12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 NUP88Q99567 741 aaPredicted RBP12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 FBXO2Q9UK22 296 aaPredicted RBP12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 CEP131Q9UPN4 1083 aa12.22□□□□□ -0.45
SMPD4P1-201ENST00000416717 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 SMCO2A6NFE2 343 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 TBC1D10BQ4KMP7 808 aaPredicted RBP12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 RESP18Q5W5W9 173 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 SAMD7Q7Z3H4 446 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 DNAJC25Q9H1X3 360 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 RIOX1Q9H6W3 641 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 PCDHA6Q9UN73 950 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 PCDHA8Q9Y5H6 950 aa12.21□□□□□ -0.45
SMPD4P1-201ENST00000416717 USP17L10C9JJH3 530 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 PTPREP23469 700 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 SLC1A4P43007 532 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 GMPSP49915 693 aaPredicted RBP12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 PTGDRQ13258 359 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 INF2Q27J81 1249 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 USP49Q70CQ1 688 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 PDILTQ8N807 584 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 CSRNP2Q9H175 543 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 JMJD4Q9H9V9 463 aa12.21□□□□□ -0.46
SMPD4P1-201ENST00000416717 ASTN2O75129 1339 aaPredicted RBP12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 CTAGE5O15320 804 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 NYAP2Q9P242 653 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 BIN1O00499 593 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 SNAP25P60880 206 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 IKQ13123 557 aaPredicted RBP12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 ISM2Q6H9L7 571 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 LUZP1Q86V48 1076 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 BIN2Q9UBW5 565 aaPredicted RBP12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 USP25Q9UHP3 1055 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 HERC5Q9UII4 1024 aaKnown RBP12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 HPSEQ9Y251 543 aa12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 SRPRBQ9Y5M8 271 aaKnown RBP12.2□□□□□ -0.46
SMPD4P1-201ENST00000416717 SMCHD1A6NHR9 2005 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 A0A1W2PRG0 241 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 VWA3AA6NCI4 1184 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 F5H6K3 240 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 M0R2N6 131 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 SMARCA1P28370 1054 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 ECE1P42892 770 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 KLRC3Q07444 240 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 LONRF3Q496Y0 759 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 GPATCH4Q5T3I0 446 aaKnown RBP12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 CCDC84Q86UT8 332 aaPredicted RBP12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 MTMR14Q8NCE2 650 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 C6orf50Q9HD87 102 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 TMEM260Q9NX78 707 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 CNOT7Q9UIV1 285 aaKnown RBP12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZNF541Q9H0D2 1346 aa12.19□□□□□ -0.46
SMPD4P1-201ENST00000416717 POLR2DO15514 142 aaKnown RBP12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 RASA3Q14644 834 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZYXQ15942 572 aaKnown RBP12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 C11orf57Q6ZUT1 292 aaPredicted RBP12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 CCDC12Q8WUD4 166 aaPredicted RBP12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 MKL1Q969V6 931 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZBED3Q96IU2 234 aaPredicted RBP12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 EPSTI1Q96J88 318 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 CBX8Q9HC52 389 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 FAM13BQ9NYF5 915 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 COL2A1P02458 1487 aaPredicted RBP12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 NDUFB10O96000 172 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 CNNM3Q8NE01 707 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 FAM200AQ8TCP9 573 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 ACER1Q8TDN7 264 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 SPON1Q9HCB6 807 aa12.18□□□□□ -0.46
SMPD4P1-201ENST00000416717 PNMA6FA0A0J9YX94 578 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 FZD9O00144 591 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 FOXN1O15353 648 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 GNA11P29992 359 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZNF165P49910 485 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 PNOCQ13519 176 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 HOMEZQ8IX15 550 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 DAGLBQ8NCG7 672 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 FHDC1Q9C0D6 1143 aaPredicted RBP12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZBTB21Q9ULJ3 1066 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 LTBP3Q9NS15 1303 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 ATAD5Q96QE3 1844 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 POLR2AP24928 1970 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 548.9 ms