RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TMEM106CQ9BVX2 250 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 KAT14Q9H8E8 782 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 TAF6LQ9Y6J9 622 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 PDHBP11177 359 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 ERCC3P19447 782 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 SART3Q15020 963 aaKnown RBP21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 MORN1Q5T089 497 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 PRPF38BQ5VTL8 546 aaKnown RBP21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 STOX1Q6ZVD7 989 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 CYB5R4Q7L1T6 521 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 PNMA1Q8ND90 353 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 REPS2Q8NFH8 660 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 SH3TC2Q8TF17 1288 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 TEX13BQ9BXU2 312 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 ZNF214Q9UL59 606 aaPredicted RBP21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 CENPFP49454 3210 aa21.13■□□□□ 0.97
SEMA3B-201ENST00000416295 ERICH2A1L162 156 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 POTEFA5A3E0 1075 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 SLC15A5A6NIM6 579 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 ATP2A1O14983 1001 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 STRNO43815 780 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 XRCC5P13010 732 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 PTPREP23469 700 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 STAT3P40763 770 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 RGS2P41220 211 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 OAZ1P54368 228 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 IFIT1BQ5T764 474 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 NCAPG2Q86XI2 1143 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 CHMP4CQ96CF2 233 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 SLC38A10Q9HBR0 1119 aa21.12■□□□□ 0.97
SEMA3B-201ENST00000416295 REC8O95072 547 aa21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 SNHG28P0DPA3 235 aa21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 UBXN2AP68543 259 aa21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 GRB14Q14449 540 aa21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 GPATCH4Q5T3I0 446 aaKnown RBP21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 RASGRP2Q7LDG7 609 aa21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 USP6NLQ92738 828 aa21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 APBA2Q99767 749 aa21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 BIN2Q9UBW5 565 aaPredicted RBP21.11■□□□□ 0.97
SEMA3B-201ENST00000416295 IFIT3O14879 490 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 ZNF543Q08ER8 600 aa21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 MAP2K5Q13163 448 aa21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 SEC23AQ15436 765 aa21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 SNRNP48Q6IEG0 339 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 BTNL9Q6UXG8 535 aa21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 MB21D2Q8IYB1 491 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 TRMT44Q8IYL2 757 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 ABRAQ8N0Z2 381 aa21.1■□□□□ 0.97
SEMA3B-201ENST00000416295 FRMPD2Q68DX3 1309 aaPredicted RBP21.09■□□□□ 0.97
SEMA3B-201ENST00000416295 ELNP15502 786 aa21.09■□□□□ 0.97
SEMA3B-201ENST00000416295 CYP2B6P20813 491 aa21.09■□□□□ 0.97
SEMA3B-201ENST00000416295 CPXCR1Q8N123 301 aa21.09■□□□□ 0.97
SEMA3B-201ENST00000416295 MTA3Q9BTC8 594 aa21.09■□□□□ 0.97
SEMA3B-201ENST00000416295 GPCPD1Q9NPB8 672 aa21.09■□□□□ 0.97
SEMA3B-201ENST00000416295 PRR12Q9ULL5 1215 aa21.09■□□□□ 0.97
SEMA3B-201ENST00000416295 HMGCRP04035 888 aa21.08■□□□□ 0.97
SEMA3B-201ENST00000416295 FCER1AP12319 257 aa21.08■□□□□ 0.97
SEMA3B-201ENST00000416295 ZKSCAN1P17029 563 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-201ENST00000416295 MCM5P33992 734 aa21.08■□□□□ 0.97
SEMA3B-201ENST00000416295 ASPRV1Q53RT3 343 aa21.08■□□□□ 0.97
SEMA3B-201ENST00000416295 SYDE2Q5VT97 1194 aa21.08■□□□□ 0.97
SEMA3B-201ENST00000416295 RAVER2Q9HCJ3 691 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-201ENST00000416295 COL11A1P12107 1806 aaPredicted RBP21.08■□□□□ 0.96
SEMA3B-201ENST00000416295 PLXNB2O15031 1838 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 INHAP05111 366 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 HOXC6P09630 235 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 ADORA2AP29274 412 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 WTAPQ15007 396 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 TMEM67Q5HYA8 995 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 TTBK2Q6IQ55 1244 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 SLC5A4Q9NY91 659 aa21.07■□□□□ 0.96
SEMA3B-201ENST00000416295 ZNF236Q9UL36 1845 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 DOCK3Q8IZD9 2030 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 PARP1P09874 1014 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 EN2P19622 333 aaPredicted RBP21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 SLC16A2P36021 539 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 ANTXR2P58335 489 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 KRT32Q14532 448 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 KCTD2Q14681 263 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 TSGA10IPQ3SY00 556 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 CHST3Q7LGC8 479 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 DPP9Q86TI2 863 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 MMP19Q99542 508 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 FBXO40Q9UH90 709 aa21.06■□□□□ 0.96
SEMA3B-201ENST00000416295 PRC1O43663 620 aa21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 SLC4A3P48751 1232 aa21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 CHST13Q8NET6 341 aa21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 TRIB2Q92519 343 aa21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 TMEM87BQ96K49 555 aa21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 RANBP17Q9H2T7 1088 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 PNMA2Q9UL42 364 aa21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 RIPK3Q9Y572 518 aa21.05■□□□□ 0.96
SEMA3B-201ENST00000416295 MYCP01106 439 aaPredicted RBP21.04■□□□□ 0.96
SEMA3B-201ENST00000416295 GOLGA8HP0CJ92 632 aa21.04■□□□□ 0.96
SEMA3B-201ENST00000416295 CCL5P13501 91 aa21.04■□□□□ 0.96
SEMA3B-201ENST00000416295 TKFCQ3LXA3 575 aa21.04■□□□□ 0.96
SEMA3B-201ENST00000416295 IGDCC4Q8TDY8 1250 aa21.04■□□□□ 0.96
SEMA3B-201ENST00000416295 NEK1Q96PY6 1258 aa21.04■□□□□ 0.96
SEMA3B-201ENST00000416295 ZNF536O15090 1300 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms