RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 ANKRD13AQ8IZ07 590 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 MTMR8Q96EF0 704 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
PTPN12-203ENST00000415482 AS3MTQ9HBK9 375 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 FBXO28Q9NVF7 368 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 PTPRFP10586 1907 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 HMGCS2P54868 508 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 NPY5RQ15761 445 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 SYDE2Q5VT97 1194 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 RBM27Q9P2N5 1060 aaKnown RBP11.31□□□□□ -0.6
PTPN12-203ENST00000415482 STXBP3O00186 592 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 CELF2O95319 508 aaKnown RBP11.31□□□□□ -0.6
PTPN12-203ENST00000415482 BAG4O95429 457 aaKnown RBP11.31□□□□□ -0.6
PTPN12-203ENST00000415482 MMP1P03956 469 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 PDIA4P13667 645 aaKnown RBP11.31□□□□□ -0.6
PTPN12-203ENST00000415482 VCAM1P19320 739 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 KIF23Q02241 960 aaPredicted RBP11.31□□□□□ -0.6
PTPN12-203ENST00000415482 IKQ13123 557 aaPredicted RBP11.31□□□□□ -0.6
PTPN12-203ENST00000415482 TRIM29Q14134 588 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 HEATR3Q7Z4Q2 680 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
PTPN12-203ENST00000415482 SMCHD1A6NHR9 2005 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 STAT2P52630 851 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 CST9Q5W186 159 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 LPAR1Q92633 364 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 COA7Q96BR5 231 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 PRR12Q9ULL5 1215 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 MYH15Q9Y2K3 1946 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 BTBD18B2RXH4 712 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 IRF6O14896 467 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
PTPN12-203ENST00000415482 TAL1P17542 331 aaPredicted RBP11.3□□□□□ -0.6
PTPN12-203ENST00000415482 GJA5P36382 358 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 USP14P54578 494 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
PTPN12-203ENST00000415482 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
PTPN12-203ENST00000415482 CLEC17AQ6ZS10 378 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
PTPN12-203ENST00000415482 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
PTPN12-203ENST00000415482 GBA2Q9HCG7 927 aaPredicted RBP11.3□□□□□ -0.6
PTPN12-203ENST00000415482 SEC63Q9UGP8 760 aaKnown RBP11.3□□□□□ -0.6
PTPN12-203ENST00000415482 PARP14Q460N5 1801 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 KIF3CO14782 793 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 ZBTB5O15062 677 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 DNM1Q05193 864 aaKnown RBP11.29□□□□□ -0.6
PTPN12-203ENST00000415482 NR5A1Q13285 461 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 ERO1BQ86YB8 467 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 DIS3L2Q8IYB7 885 aaKnown RBP11.29□□□□□ -0.6
PTPN12-203ENST00000415482 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 OPTNQ96CV9 577 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 C12orf42Q96LP6 360 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
PTPN12-203ENST00000415482 FEM1BQ9UK73 627 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 RLFQ13129 1914 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 C19orf81C9J6K1 198 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 PLA2G6O60733 806 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 PPATQ06203 517 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 NOM1Q5C9Z4 860 aaKnown RBP11.29□□□□□ -0.6
PTPN12-203ENST00000415482 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 SH3GLB2Q9NR46 395 aa11.29□□□□□ -0.6
PTPN12-203ENST00000415482 XBP1P17861 261 aa11.28□□□□□ -0.6
PTPN12-203ENST00000415482 U2AF2P26368 475 aaKnown RBP eCLIP11.28□□□□□ -0.68e-13■■■■■ 37.7
PTPN12-203ENST00000415482 NAPAP54920 295 aa11.28□□□□□ -0.6
PTPN12-203ENST00000415482 NLRP5P59047 1200 aa11.28□□□□□ -0.6
PTPN12-203ENST00000415482 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
PTPN12-203ENST00000415482 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-203ENST00000415482 CNPY2Q9Y2B0 182 aa11.28□□□□□ -0.6
PTPN12-203ENST00000415482 FAM205CA6NFA0 338 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 PPIL2Q13356 520 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.6
PTPN12-203ENST00000415482 TREML2Q5T2D2 321 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 FAM160B2Q86V87 743 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 TNFRSF25Q93038 417 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 FTOQ9C0B1 505 aaKnown RBP eCLIP11.27□□□□□ -0.6
PTPN12-203ENST00000415482 GDPD2Q9HCC8 539 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.6
PTPN12-203ENST00000415482 TFIP11Q9UBB9 837 aaKnown RBP11.27□□□□□ -0.6
PTPN12-203ENST00000415482 LOC285556D6RIA3 1793 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 FLOT1O75955 427 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 MCM4P33991 863 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 KRT2P35908 639 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 FKBP1BP68106 108 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTPN12-203ENST00000415482 CCDC174Q6PII3 467 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 C2orf69Q8N8R5 385 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
PTPN12-203ENST00000415482 RASGRP4Q8TDF6 673 aa11.27□□□□□ -0.61
PTPN12-203ENST00000415482 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms