RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 STAT2P52630 851 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 SNAP25P60880 206 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 FASTKD5Q7L8L6 764 aaKnown RBP15.25■□□□□ 0.03
CNOT4-204ENST00000414802 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 KIFC2Q96AC6 838 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 CYTH3O43739 400 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 BECN1Q14457 450 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 NTRK3Q16288 839 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 SYDE2Q5VT97 1194 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 FAM43AQ8N2R8 423 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 NSUN7Q8NE18 718 aaKnown RBP15.24■□□□□ 0.03
CNOT4-204ENST00000414802 PTPN18Q99952 460 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 FEM1BQ9UK73 627 aa15.24■□□□□ 0.03
CNOT4-204ENST00000414802 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 MANSC4A6NHS7 340 aaPredicted RBP15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L15C9J2P7 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L13C9JLJ4 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L11C9JVI0 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L18D6R9N7 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L22D6RA61 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L17D6RBQ6 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L19D6RCP7 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L20D6RJB6 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 IGF2BP3O00425 579 aaKnown RBP eCLIP15.23■□□□□ 0.03
CNOT4-204ENST00000414802 HSPA6P17066 643 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 KIF23Q02241 960 aaPredicted RBP15.23■□□□□ 0.03
CNOT4-204ENST00000414802 USP17L24Q0WX57 530 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 FUT2Q10981 343 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 ADGRF4Q8IZF3 695 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 ATG4CQ96DT6 458 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 SLF1Q9BQI6 1058 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 PRR12Q9ULL5 1215 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 DOCK3Q8IZD9 2030 aa15.23■□□□□ 0.03
CNOT4-204ENST00000414802 ZNFX1Q9P2E3 1918 aaKnown RBP15.23■□□□□ 0.03
CNOT4-204ENST00000414802 TAL1P17542 331 aaPredicted RBP15.22■□□□□ 0.03
CNOT4-204ENST00000414802 VEGFBP49765 207 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 GNAQP50148 359 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 IRX3P78415 501 aaPredicted RBP15.22■□□□□ 0.03
CNOT4-204ENST00000414802 CUL4AQ13619 759 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 BTNL9Q6UXG8 535 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 DDX11Q96FC9 970 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 SPZ1Q9BXG8 430 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 ASCC2Q9H1I8 757 aaPredicted RBP15.22■□□□□ 0.03
CNOT4-204ENST00000414802 PPP1R9AQ9ULJ8 1098 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
CNOT4-204ENST00000414802 MGAMO43451 1857 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 SPDYE16A6NNV3 312 aaPredicted RBP15.22■□□□□ 0.03
CNOT4-204ENST00000414802 PDHXO00330 501 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 PEX10O60683 326 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 IFNAR1P17181 557 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 PPP2R5BQ15173 497 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 FAM160B2Q86V87 743 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 CHURC1Q8WUH1 139 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 PIGSQ96S52 555 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 JMJD4Q9H9V9 463 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 PCNTO95613 3336 aa15.22■□□□□ 0.03
CNOT4-204ENST00000414802 ZSWIM8A7E2V4 1837 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 PLXNB2O15031 1838 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 TESPA1A2RU30 521 aaPredicted RBP15.21■□□□□ 0.03
CNOT4-204ENST00000414802 CYP2C8P10632 490 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 HOXA7P31268 230 aaPredicted RBP15.21■□□□□ 0.03
CNOT4-204ENST00000414802 DSG3P32926 999 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 FOSBP53539 338 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 NOGQ13253 232 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 CDC37Q16543 378 aaPredicted RBP15.21■□□□□ 0.03
CNOT4-204ENST00000414802 CCDC174Q6PII3 467 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 CPLX2Q6PUV4 134 aaKnown RBP15.21■□□□□ 0.03
CNOT4-204ENST00000414802 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 ANKRD23Q86SG2 305 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 P2RX7Q99572 595 aaKnown RBP15.21■□□□□ 0.03
CNOT4-204ENST00000414802 LZTS2Q9BRK4 669 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 RIOX1Q9H6W3 641 aa15.21■□□□□ 0.03
CNOT4-204ENST00000414802 CDKL5O76039 1030 aa15.2■□□□□ 0.02
CNOT4-204ENST00000414802 FMNL1O95466 1100 aaPredicted RBP15.2■□□□□ 0.02
CNOT4-204ENST00000414802 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
CNOT4-204ENST00000414802 SREBF2Q12772 1141 aa15.2■□□□□ 0.02
CNOT4-204ENST00000414802 PABPC4Q13310 644 aaKnown RBP eCLIP15.2■□□□□ 0.02
CNOT4-204ENST00000414802 AIFM3Q96NN9 605 aa15.2■□□□□ 0.02
CNOT4-204ENST00000414802 V9GY48 417 aaPredicted RBP15.2■□□□□ 0.02
CNOT4-204ENST00000414802 LCTP09848 1927 aa15.2■□□□□ 0.02
CNOT4-204ENST00000414802 PLA2G6O60733 806 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 HSP90AA1P07900 732 aaKnown RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 OSBPP22059 807 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 HERVK_113P62684 666 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 COG2Q14746 738 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 PRPF38AQ8NAV1 312 aaKnown RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 GPKOWQ92917 476 aaPredicted RBP eCLIP15.19■□□□□ 0.023e-6■■■■□ 20.4
CNOT4-204ENST00000414802 ORC3Q9UBD5 711 aaPredicted RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 MYH15Q9Y2K3 1946 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 CEP350Q5VT06 3117 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 FDPSP14324 419 aaKnown RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 POTEEQ6S8J3 1075 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms