RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 USP17L22D6RA61 530 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 USP17L17D6RBQ6 530 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 USP17L19D6RCP7 530 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 USP17L20D6RJB6 530 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 CDKL5O76039 1030 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 USP17L24Q0WX57 530 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 NTRK3Q16288 839 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 NBPF11Q86T75 865 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 FAM43AQ8N2R8 423 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 CPVLQ9H3G5 476 aa17.84■□□□□ 0.45
LINC00116-201ENST00000414416 PLA2G6O60733 806 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 FLOT1O75955 427 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 IFNAR1P17181 557 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 GSE1Q14687 1217 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 BTNL9Q6UXG8 535 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 CATSPERGQ6ZRH7 1159 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 FAM160B2Q86V87 743 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 BRI3BPQ8WY22 251 aa17.83■□□□□ 0.45
LINC00116-201ENST00000414416 LLPHQ9BRT6 129 aaKnown RBP17.83■□□□□ 0.45
LINC00116-201ENST00000414416 CTDNEP1O95476 244 aa17.83■□□□□ 0.44
LINC00116-201ENST00000414416 SMARCA1P28370 1054 aa17.83■□□□□ 0.44
LINC00116-201ENST00000414416 HOXA7P31268 230 aaPredicted RBP17.83■□□□□ 0.44
LINC00116-201ENST00000414416 PABPC4Q13310 644 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC00116-201ENST00000414416 GPAT2Q6NUI2 795 aa17.83■□□□□ 0.44
LINC00116-201ENST00000414416 INTS4Q96HW7 963 aaKnown RBP17.83■□□□□ 0.44
LINC00116-201ENST00000414416 SPZ1Q9BXG8 430 aa17.83■□□□□ 0.44
LINC00116-201ENST00000414416 CWC22Q9HCG8 908 aaKnown RBP17.83■□□□□ 0.44
LINC00116-201ENST00000414416 FBXO28Q9NVF7 368 aa17.83■□□□□ 0.44
LINC00116-201ENST00000414416 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.83■□□□□ 0.44
LINC00116-201ENST00000414416 FUT2Q10981 343 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 SYDE2Q5VT97 1194 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
LINC00116-201ENST00000414416 ADGRF4Q8IZF3 695 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 NSUN7Q8NE18 718 aaKnown RBP17.82■□□□□ 0.44
LINC00116-201ENST00000414416 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
LINC00116-201ENST00000414416 PHKBQ93100 1093 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 KIFC2Q96AC6 838 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 CAPNS2Q96L46 248 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 SLF1Q9BQI6 1058 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 VAT1LQ9HCJ6 419 aa17.82■□□□□ 0.44
LINC00116-201ENST00000414416 TESPA1A2RU30 521 aaPredicted RBP17.81■□□□□ 0.44
LINC00116-201ENST00000414416 CYTH3O43739 400 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 PPFIA3O75145 1194 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 C1QTNF8P60827 252 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 HTRA3P83110 453 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 NOGQ13253 232 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 PRPF38AQ8NAV1 312 aaKnown RBP17.81■□□□□ 0.44
LINC00116-201ENST00000414416 RIOX1Q9H6W3 641 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 CNTNAP5Q8WYK1 1306 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 PTPDC1A2A3K4 754 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 BTBD19C9JJ37 291 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 INHBEP58166 350 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 SSRP1Q08945 709 aaKnown RBP17.81■□□□□ 0.44
LINC00116-201ENST00000414416 COG2Q14746 738 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 ANKRD23Q86SG2 305 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 TRIM22Q8IYM9 498 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 SLC26A6Q9BXS9 759 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 PPP1R9AQ9ULJ8 1098 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
LINC00116-201ENST00000414416 JAK2O60674 1132 aa17.8■□□□□ 0.44
LINC00116-201ENST00000414416 IRX3P78415 501 aaPredicted RBP17.8■□□□□ 0.44
LINC00116-201ENST00000414416 AKAP17AQ02040 695 aaKnown RBP17.8■□□□□ 0.44
LINC00116-201ENST00000414416 SREBF2Q12772 1141 aa17.8■□□□□ 0.44
LINC00116-201ENST00000414416 RNF26Q9BY78 433 aaPredicted RBP17.8■□□□□ 0.44
LINC00116-201ENST00000414416 JMJD4Q9H9V9 463 aa17.8■□□□□ 0.44
LINC00116-201ENST00000414416 SLC45A1Q9Y2W3 748 aa17.8■□□□□ 0.44
LINC00116-201ENST00000414416 ZDHHC9Q9Y397 364 aa17.8■□□□□ 0.44
LINC00116-201ENST00000414416 PDHXO00330 501 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 FMNL1O95466 1100 aaPredicted RBP17.79■□□□□ 0.44
LINC00116-201ENST00000414416 OSBPP22059 807 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 PIBF1Q8WXW3 757 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 RRP36Q96EU6 259 aaKnown RBP17.79■□□□□ 0.44
LINC00116-201ENST00000414416 PTPN18Q99952 460 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 ASCC2Q9H1I8 757 aaPredicted RBP17.79■□□□□ 0.44
LINC00116-201ENST00000414416 HOXC10Q9NYD6 342 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
LINC00116-201ENST00000414416 DSG3P32926 999 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 PNMA3Q9UL41 463 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 SMC3Q9UQE7 1217 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 MYPNQ86TC9 1320 aa17.79■□□□□ 0.44
LINC00116-201ENST00000414416 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 hCG_1642624A0A1W2PR95 340 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 PRPF3O43395 683 aaKnown RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 HSPA6P17066 643 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 KIF23Q02241 960 aaPredicted RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 PIGSQ96S52 555 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 RBM27Q9P2N5 1060 aaKnown RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 SEC63Q9UGP8 760 aaKnown RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 STK36Q9NRP7 1315 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 PARP14Q460N5 1801 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 SPDYE16A6NNV3 312 aaPredicted RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 AOC2O75106 756 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 CDC37Q16543 378 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms