RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 C8orf34Q49A92 452 aa6.55□□□□□ -1.36
PRDM2-206ENST00000413440 HACE1Q8IYU2 909 aa6.55□□□□□ -1.36
PRDM2-206ENST00000413440 SCG3Q8WXD2 468 aaKnown RBP6.55□□□□□ -1.36
PRDM2-206ENST00000413440 RUFY1Q96T51 708 aa6.55□□□□□ -1.36
PRDM2-206ENST00000413440 NUP188Q5SRE5 1749 aa6.55□□□□□ -1.36
PRDM2-206ENST00000413440 MBD3O95983 291 aa6.55□□□□□ -1.36
PRDM2-206ENST00000413440 METAP2P50579 478 aaKnown RBP eCLIP6.55□□□□□ -1.36
PRDM2-206ENST00000413440 TMEM179Q6ZVK1 233 aa6.55□□□□□ -1.36
PRDM2-206ENST00000413440 FBXO33Q7Z6M2 555 aa6.55□□□□□ -1.36
PRDM2-206ENST00000413440 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.55□□□□□ -1.36
PRDM2-206ENST00000413440 CHMP2AO43633 222 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 ADCY3O60266 1144 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 MCM4P33991 863 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SSR1P43307 286 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 MMP14P50281 582 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SLFNL1Q499Z3 407 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 RASAL3Q86YV0 1011 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 C7orf61Q8IZ16 206 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 CCDC12Q8WUD4 166 aaPredicted RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SEC62Q99442 399 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 HTATIP2Q9BUP3 242 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 KANSL2Q9H9L4 492 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 GADD45BO75293 160 aaPredicted RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 BAG4O95429 457 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 CYP2E1P05181 493 aaPredicted RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 IL1R1P14778 569 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 MRE11P49959 708 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 MLLT1Q03111 559 aaPredicted RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 CFAP58Q5T655 872 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 GSDMBQ8TAX9 411 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 CHAMP1Q96JM3 812 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 CCDC17Q96LX7 622 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 FAM227BQ96M60 508 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 TRERF1Q96PN7 1200 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 LUC7LQ9NQ29 371 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 MAGEC2Q9UBF1 373 aaPredicted RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 EIF3CLB5ME19 914 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SRGAP2BP0DMP2 458 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 BMP3P12645 472 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 MCM5P33992 734 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SNX16P57768 344 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SMC1AQ14683 1233 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 RNF169Q8NCN4 708 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SLC44A5Q8NCS7 719 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 HAUS7Q99871 368 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 AZI2Q9H6S1 392 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 TRPC6Q9Y210 931 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 RTL9Q8NET4 1388 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 NDC80O14777 642 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 TLR3O15455 904 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 ENTPD3O75355 529 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 LETM1O95202 739 aaPredicted RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 RARBP10826 455 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 EEF2P13639 858 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 DHX8Q14562 1220 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 PLEKHH3Q7Z736 793 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 CTU1Q7Z7A3 348 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 TBC1D32Q96NH3 1257 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 ESYT1Q9BSJ8 1104 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 ALG1Q9BT22 464 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 SENP6Q9GZR1 1112 aaPredicted RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 ATP8A2Q9NTI2 1148 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 HERC5Q9UII4 1024 aaKnown RBP6.54□□□□□ -1.36
PRDM2-206ENST00000413440 LTBP3Q9NS15 1303 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 RTN1Q16799 776 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 KBTBD3Q8NAB2 608 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 ZDHHC15Q96MV8 337 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 LIMCH1Q9UPQ0 1083 aa6.54□□□□□ -1.36
PRDM2-206ENST00000413440 PKD1L3Q7Z443 1732 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 CCDC196A0A1B0GTZ2 297 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 C19orf81C9J6K1 198 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 FOXN1O15353 648 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 ATP5JP18859 108 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 ARL1P40616 181 aaPredicted RBP6.53□□□□□ -1.36
PRDM2-206ENST00000413440 TTC30AQ86WT1 665 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 TXLNBQ8N3L3 684 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 NEK1Q96PY6 1258 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 NCAPGQ9BPX3 1015 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 NOL7Q9UMY1 257 aaKnown RBP6.53□□□□□ -1.36
PRDM2-206ENST00000413440 FLT1P17948 1338 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 ADD2P35612 726 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 PTGDRQ13258 359 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 RNF187Q5TA31 235 aaPredicted RBP6.53□□□□□ -1.36
PRDM2-206ENST00000413440 ATG9AQ7Z3C6 839 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 PLEKHM2Q8IWE5 1019 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 METTL13Q8N6R0 699 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 ACRBPQ8NEB7 543 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 RBM8AQ9Y5S9 174 aaKnown RBP6.53□□□□□ -1.36
PRDM2-206ENST00000413440 WNK3Q9BYP7 1800 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 KIF3CO14782 793 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 DTNBO60941 627 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 SERPINC1P01008 464 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 PPIL2Q13356 520 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 SYDE2Q5VT97 1194 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 SPRYD7Q5W111 196 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 GLG1Q92896 1179 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 C8orf76Q96K31 380 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 UBA5Q9GZZ9 404 aa6.53□□□□□ -1.36
PRDM2-206ENST00000413440 LMCD1Q9NZU5 365 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms