RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 GNAQP50148 359 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 PRMT2P55345 433 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 PPATQ06203 517 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 KLRC3Q07444 240 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 PPIL2Q13356 520 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 PPP2R5BQ15173 497 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 GPATCH4Q5T3I0 446 aaKnown RBP10.4□□□□□ -0.74
HCG18-234ENST00000413358 SPICE1Q8N0Z3 855 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 FANCBQ8NB91 859 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 BRI3BPQ8WY22 251 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 LPAR1Q92633 364 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 GMCL1Q96IK5 515 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 ZCCHC17Q9NP64 241 aaKnown RBP10.4□□□□□ -0.74
HCG18-234ENST00000413358 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
HCG18-234ENST00000413358 PTPDC1A2A3K4 754 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 TLR2O60603 784 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 PLEKHA8P1O95397 391 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 GOLGA8HP0CJ92 632 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 SNHG28P0DPA3 235 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 BMP3P12645 472 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 CDC27P30260 824 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 HMGCS2P54868 508 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 BACE1P56817 501 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 ST3GAL1Q11201 340 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 CUL4AQ13619 759 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 USP17L2Q6R6M4 530 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 TMTC3Q6ZXV5 915 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 SIAH1Q8IUQ4 282 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 TRIM22Q8IYM9 498 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 ZNF333Q96JL9 665 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 IPO9Q96P70 1041 aaKnown RBP10.39□□□□□ -0.75
HCG18-234ENST00000413358 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
HCG18-234ENST00000413358 TANGO6Q9C0B7 1094 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 GPCPD1Q9NPB8 672 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 SMC3Q9UQE7 1217 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 AFG3L2Q9Y4W6 797 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 PHIPQ8WWQ0 1821 aa10.39□□□□□ -0.75
HCG18-234ENST00000413358 C19orf81C9J6K1 198 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 KLRF2D3W0D1 207 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 IRF6O14896 467 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 WDR46O15213 610 aaKnown RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 MYCP01106 439 aaPredicted RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 VCAM1P19320 739 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 ADD1P35611 737 aaKnown RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 HMGN5P82970 282 aaKnown RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 AKAP17AQ02040 695 aaKnown RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 FAM83BQ5T0W9 1011 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 GADL1Q6ZQY3 521 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 KCTD1Q719H9 257 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 FAM43AQ8N2R8 423 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 NSUN7Q8NE18 718 aaKnown RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 LLPHQ9BRT6 129 aaKnown RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 SLC26A6Q9BXS9 759 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 MAD2L2Q9UI95 211 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 KIF3AQ9Y496 699 aa10.38□□□□□ -0.75
HCG18-234ENST00000413358 TNRC18O15417 2968 aaPredicted RBP10.38□□□□□ -0.75
HCG18-234ENST00000413358 CNTNAP5Q8WYK1 1306 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 LOC285556D6RIA3 1793 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 A0A0G2JLL6 359 aaPredicted RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 PALM3A6NDB9 673 aaPredicted RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 BTBD19C9JJ37 291 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 CXCL11O14625 94 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 JAK2O60674 1132 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 IFNAR1P17181 557 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 STAT2P52630 851 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 LACTBP83111 547 aaPredicted RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 SSRP1Q08945 709 aaKnown RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 PRRT2Q7Z6L0 340 aaPredicted RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 STAG2Q8N3U4 1231 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 CCDC82Q8N4S0 544 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 RAET1EQ8TD07 263 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 PHKBQ93100 1093 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 DDX11Q96FC9 970 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 RPAP3Q9H6T3 665 aaPredicted RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 RBM27Q9P2N5 1060 aaKnown RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 BIN2Q9UBW5 565 aaPredicted RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 SEC63Q9UGP8 760 aaKnown RBP10.37□□□□□ -0.75
HCG18-234ENST00000413358 KCNH4Q9UQ05 1017 aa10.37□□□□□ -0.75
HCG18-234ENST00000413358 STK36Q9NRP7 1315 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 TMEM232C9JQI7 657 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
HCG18-234ENST00000413358 GJB2P29033 226 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 SLC16A2P36021 539 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 SH3D19Q5HYK7 790 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 SYDE2Q5VT97 1194 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 FAM160B2Q86V87 743 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms