RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PRKCAP17252 672 aa4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 PFKLP17858 780 aa4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 LIMS1P48059 325 aa4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 RNF4P78317 190 aa4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 ZXDAP98168 799 aa4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 CYP4F8P98187 520 aa4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 HSF5Q4G112 596 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 FERMT3Q86UX7 667 aa4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 GPR55Q9Y2T6 319 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P2-201ENST00000411913 FADS2P1A8MWK0 482 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 MAGEA10P43363 369 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 NT5DC1Q5TFE4 455 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 BNC2Q6ZN30 1099 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 TMC3Q7Z5M5 1100 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 CCDC84Q86UT8 332 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 LSRQ86X29 649 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 NUP43Q8NFH3 380 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 VWCEQ96DN2 955 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 FCRL2Q96LA5 508 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 SUSD2Q9UGT4 822 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 SRRDQ9UH36 339 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 AK5Q9Y6K8 562 aa4.65□□□□□ -1.67
HMGB3P2-201ENST00000411913 GRIN3BO60391 1043 aa4.64□□□□□ -1.67
HMGB3P2-201ENST00000411913 HTR3BO95264 441 aa4.64□□□□□ -1.67
HMGB3P2-201ENST00000411913 CAP1Q01518 475 aa4.64□□□□□ -1.67
HMGB3P2-201ENST00000411913 BBS9Q3SYG4 887 aa4.64□□□□□ -1.67
HMGB3P2-201ENST00000411913 RPTNQ6XPR3 784 aa4.64□□□□□ -1.67
HMGB3P2-201ENST00000411913 CRELD1Q96HD1 420 aa4.64□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1W2PQ27 194 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1W2PQ64 194 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1W2PQC6 194 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1W2PQD8 194 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 ZNF200P98182 395 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 MLECQ14165 292 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 CBX2Q14781 532 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 TARBP2Q15633 366 aaKnown RBP4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 MEI1Q5TIA1 1274 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 ZC3H14Q6PJT7 736 aaKnown RBP4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 ADGRG2Q8IZP9 1017 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 PHC3Q8NDX5 983 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 SPATA25Q9BR10 227 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 CDADC1Q9BWV3 514 aa4.63□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1B0GTL3 188 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1W2PQ45 241 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1W2PQY0 241 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 FAM221AA4D161 298 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 SUPT5HO00267 1087 aaKnown RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 RGS13O14921 159 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 PRAMEF1O95521 474 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 FSHBP01225 129 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 TNFRSF1AP19438 455 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 ENDOUP21128 410 aaKnown RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 IGFBP6P24592 240 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 CAMK2GQ13555 558 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 SNW1Q13573 536 aaKnown RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 NR1I3Q14994 352 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 NBPF9Q3BBW0 867 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 PLEKHN1Q494U1 663 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 SLC16A11Q8NCK7 471 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 GATAD2BQ8WXI9 593 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 DDX1Q92499 740 aaKnown RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 EAF1Q96JC9 268 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 TNFRSF12AQ9NP84 129 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 SMPD4Q9NXE4 827 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 PRR36Q9H6K5 1346 aa4.62□□□□□ -1.67
HMGB3P2-201ENST00000411913 F6X3S4 739 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 PRPF40AO75400 957 aaKnown RBP4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 F13A1P00488 732 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 MSL3P1P0C860 447 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 RAG1P15918 1043 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 MAPKAPK2P49137 400 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 ADAM17P78536 824 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 LMNB2Q03252 620 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 TAF1CQ15572 869 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 LIPIQ6XZB0 460 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 SLCO6A1Q86UG4 719 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 FNIP1Q8TF40 1166 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 NOC4LQ9BVI4 516 aaKnown RBP4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 IMPACTQ9P2X3 320 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 ACSL6Q9UKU0 697 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 FAN1Q9Y2M0 1017 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 PMF1-BGLAPU3KQ54 211 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 IRS2Q9Y4H2 1338 aa4.61□□□□□ -1.67
HMGB3P2-201ENST00000411913 A0A1W2PQJ5 194 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 MEIS1O00470 390 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 SIGLEC6O43699 453 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 DNAJA2O60884 412 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 UBOX5O94941 541 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 PF4P02776 101 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 CNR2P34972 360 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 FOXO4P98177 505 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 ARSHQ5FYA8 562 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 NBPF12Q5TAG4 269 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 AEBP1Q8IUX7 1158 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 PRDM14Q9GZV8 571 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 CHST7Q9NS84 486 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 ERVK13-1Q9NX77 482 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 MINPP1Q9UNW1 487 aa4.6□□□□□ -1.67
HMGB3P2-201ENST00000411913 POLR3KQ9Y2Y1 108 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms