RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 AKR1A1P14550 325 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 RASA1P20936 1047 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 ITGB8P26012 769 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
MRPL48-204ENST00000411840 DDX11Q96FC9 970 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 CDX2Q99626 313 aaPredicted RBP10.9□□□□□ -0.66
MRPL48-204ENST00000411840 SLF1Q9BQI6 1058 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 TEX13BQ9BXU2 312 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 NYAP2Q9P242 653 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 CLIP2Q9UDT6 1046 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 RIPK3Q9Y572 518 aa10.9□□□□□ -0.66
MRPL48-204ENST00000411840 NAV1Q8NEY1 1877 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 SPTBN5Q9NRC6 3674 aaKnown RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 PQBP1O60828 265 aaKnown RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 ZBED4O75132 1171 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 ADAMTS4O75173 837 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 SNAI1O95863 264 aaPredicted RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 NDUFB10O96000 172 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 CLTBP09497 229 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 RAG1P15918 1043 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 SLC4A3P48751 1232 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 ACLYP53396 1101 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 EPHB4P54760 987 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 SMAD3P84022 425 aaKnown RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 C20orf194Q5TEA3 1177 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 SNRNP48Q6IEG0 339 aaKnown RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 MSL3Q8N5Y2 521 aaKnown RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 OSBP2Q969R2 916 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 LENG1Q96BZ8 264 aaPredicted RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 COL25A1Q9BXS0 654 aaPredicted RBP10.89□□□□□ -0.67
MRPL48-204ENST00000411840 RCAN3Q9UKA8 241 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
MRPL48-204ENST00000411840 DNAJC25-GNG10A0A024R161 153 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 ATP2A1O14983 1001 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 KIAA0355O15063 1070 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 RNF113AO15541 343 aaKnown RBP10.88□□□□□ -0.67
MRPL48-204ENST00000411840 FAAP100Q0VG06 881 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 KCNA10Q16322 511 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 MAMDC4Q6UXC1 1216 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 ANKRD33Q7Z3H0 272 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 ZNF444Q8N0Y2 327 aaPredicted RBP10.88□□□□□ -0.67
MRPL48-204ENST00000411840 CPXCR1Q8N123 301 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 KBTBD3Q8NAB2 608 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 APPBP2Q92624 585 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 MKL1Q969V6 931 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 TOX2Q96NM4 488 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 TTYH1Q9H313 450 aaPredicted RBP10.88□□□□□ -0.67
MRPL48-204ENST00000411840 TMEM39AQ9NV64 488 aa10.88□□□□□ -0.67
MRPL48-204ENST00000411840 SYNGAP1Q96PV0 1343 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 SYNRGQ9UMZ2 1314 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 VCANP13611 3396 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 IGKV6D-41A0A0C4DH26 115 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 DCDC2CA8MYV0 355 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 PRDM1O75626 825 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 APPP05067 770 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 ACVR2BQ13705 512 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 CCSAPQ6IQ19 270 aaPredicted RBP10.87□□□□□ -0.67
MRPL48-204ENST00000411840 ZNF467Q7Z7K2 595 aaPredicted RBP10.87□□□□□ -0.67
MRPL48-204ENST00000411840 ANKRD35Q8N283 1001 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 KLHDC9Q8NEP7 349 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 MYLIPQ8WY64 445 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 SLC38A10Q9HBR0 1119 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 ZNF287Q9HBT7 754 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 RAVER2Q9HCJ3 691 aaKnown RBP10.87□□□□□ -0.67
MRPL48-204ENST00000411840 STARD7Q9NQZ5 370 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 ZHX1Q9UKY1 873 aaPredicted RBP10.87□□□□□ -0.67
MRPL48-204ENST00000411840 CTDP1Q9Y5B0 961 aaPredicted RBP10.87□□□□□ -0.67
MRPL48-204ENST00000411840 RLFQ13129 1914 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 ROBO3Q96MS0 1386 aa10.87□□□□□ -0.67
MRPL48-204ENST00000411840 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 PATL2C9JE40 543 aaKnown RBP10.86□□□□□ -0.67
MRPL48-204ENST00000411840 GPAA1O43292 621 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 DUSP11O75319 330 aaKnown RBP10.86□□□□□ -0.67
MRPL48-204ENST00000411840 ZFYP08048 801 aaPredicted RBP10.86□□□□□ -0.67
MRPL48-204ENST00000411840 GNAT2P19087 354 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 TDO2P48775 406 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 FPGSQ05932 587 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 TSHZ3Q63HK5 1081 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 MAFAQ8NHW3 353 aaPredicted RBP10.86□□□□□ -0.67
MRPL48-204ENST00000411840 CEP95Q96GE4 821 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 GPATCH3Q96I76 525 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 RNPC3Q96LT9 517 aaKnown RBP10.86□□□□□ -0.67
MRPL48-204ENST00000411840 DCTPP1Q9H773 170 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 EPB41L4AQ9HCS5 686 aaPredicted RBP10.86□□□□□ -0.67
MRPL48-204ENST00000411840 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
MRPL48-204ENST00000411840 FEM1BQ9UK73 627 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 FRMPD3Q5JV73 1810 aa10.86□□□□□ -0.67
MRPL48-204ENST00000411840 MYADML2A6NDP7 307 aa10.85□□□□□ -0.67
MRPL48-204ENST00000411840 M0R2C6 588 aa10.85□□□□□ -0.67
MRPL48-204ENST00000411840 TTLL1O95922 423 aa10.85□□□□□ -0.67
MRPL48-204ENST00000411840 TIMP1P01033 207 aa10.85□□□□□ -0.67
MRPL48-204ENST00000411840 BMP3P12645 472 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms