RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 SEPT4O43236 478 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 DXOO77932 396 aaKnown RBP7.94□□□□□ -1.14
LINC00396-201ENST00000411690 TIMP1P01033 207 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 FOXK2Q01167 660 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 FAAP100Q0VG06 881 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 PPIGQ13427 754 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00396-201ENST00000411690 LRRC24Q50LG9 513 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 TMEM240Q5SV17 173 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 RASIP1Q5U651 963 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 KCNH6Q9H252 994 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 DDX4Q9NQI0 724 aaKnown RBP7.94□□□□□ -1.14
LINC00396-201ENST00000411690 KIF16BQ96L93 1317 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 DNAH12Q6ZR08 3092 aa7.94□□□□□ -1.14
LINC00396-201ENST00000411690 GPR37O15354 613 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 GRB14Q14449 540 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 CSPP1Q1MSJ5 1256 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 BEND3Q5T5X7 828 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 MFSD5Q6N075 450 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 C16orf59Q7L2K0 433 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 DPP9Q86TI2 863 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 VGLL2Q8N8G2 317 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 TOX2Q96NM4 488 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 C9orf78Q9NZ63 289 aaPredicted RBP7.93□□□□□ -1.14
LINC00396-201ENST00000411690 PHF24Q9UPV7 400 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 RABGAP1Q9Y3P9 1069 aa7.93□□□□□ -1.14
LINC00396-201ENST00000411690 USP17L10C9JJH3 530 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 IGHA2P01877 340 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 CSF2RAP15509 400 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 RRP1BQ14684 758 aaKnown RBP7.92□□□□□ -1.14
LINC00396-201ENST00000411690 WDR43Q15061 677 aaKnown RBP eCLIP7.92□□□□□ -1.14
LINC00396-201ENST00000411690 PUM3Q15397 648 aaKnown RBP7.92□□□□□ -1.14
LINC00396-201ENST00000411690 TWISTNBQ3B726 338 aaPredicted RBP7.92□□□□□ -1.14
LINC00396-201ENST00000411690 FAM47AQ5JRC9 791 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 PPP2R2DQ66LE6 453 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 OLFML2BQ68BL8 750 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 PSRC1Q6PGN9 363 aaPredicted RBP7.92□□□□□ -1.14
LINC00396-201ENST00000411690 ZNF365Q70YC5 407 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 ANKRD33Q7Z3H0 272 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 RNF180Q86T96 592 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 NPAS3Q8IXF0 933 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 TMEM199Q8N511 208 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 HLA-CQ95604 372 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 MTIF3Q9H2K0 278 aaKnown RBP7.92□□□□□ -1.14
LINC00396-201ENST00000411690 CD320Q9NPF0 282 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 YBX2Q9Y2T7 364 aaKnown RBP7.92□□□□□ -1.14
LINC00396-201ENST00000411690 RFX7Q2KHR2 1363 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 LRRC37A2A6NM11 1700 aa7.92□□□□□ -1.14
LINC00396-201ENST00000411690 A0A1W2PQ45 241 aaPredicted RBP7.91□□□□□ -1.14
LINC00396-201ENST00000411690 A0A1W2PQY0 241 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 F6X3S4 739 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 APBB1O00213 710 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 CNMDO75829 334 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 ASNSP08243 561 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 ACRP10323 421 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 ALADP13716 330 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 SLC5A1P13866 664 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 FGFR2P21802 821 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 BTDP43251 543 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 PRAMEF19Q5SWL8 479 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 XPNPEP3Q9NQH7 507 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 GNL3LQ9NVN8 582 aaKnown RBP7.91□□□□□ -1.14
LINC00396-201ENST00000411690 ADAMTS8Q9UP79 889 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 MTCH2Q9Y6C9 303 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 GAKO14976 1311 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 SALL1Q9NSC2 1324 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 MYO9BQ13459 2157 aa7.91□□□□□ -1.14
LINC00396-201ENST00000411690 ATAD5Q96QE3 1844 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 ZNF521Q96K83 1311 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 RARBP10826 455 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 POU3F3P20264 500 aaPredicted RBP7.9□□□□□ -1.14
LINC00396-201ENST00000411690 RABGGTBP53611 331 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 WNT7BP56706 349 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 DZIP1Q86YF9 867 aaKnown RBP7.9□□□□□ -1.14
LINC00396-201ENST00000411690 GJD3Q8N144 294 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 ZGPATQ8N5A5 531 aaKnown RBP7.9□□□□□ -1.14
LINC00396-201ENST00000411690 LPIN2Q92539 896 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 TSR2Q969E8 191 aaKnown RBP7.9□□□□□ -1.14
LINC00396-201ENST00000411690 SUCLG2Q96I99 432 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 USB1Q9BQ65 265 aaKnown RBP7.9□□□□□ -1.14
LINC00396-201ENST00000411690 STARD7Q9NQZ5 370 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 HERC5Q9UII4 1024 aaKnown RBP7.9□□□□□ -1.14
LINC00396-201ENST00000411690 TBX21Q9UL17 535 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 DENND2AQ9ULE3 1009 aa7.9□□□□□ -1.14
LINC00396-201ENST00000411690 MYH13Q9UKX3 1938 aa7.9□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 RFXAPO00287 272 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 APAF1O14727 1248 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 CAPN5O15484 640 aaPredicted RBP7.89□□□□□ -1.15
LINC00396-201ENST00000411690 STRNO43815 780 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 PGK1P00558 417 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 FGBP02675 491 aa7.89□□□□□ -1.15
LINC00396-201ENST00000411690 ADORA2AP29274 412 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms