RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 LMNB1P20700 586 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 PTPREP23469 700 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 TTC31Q49AM3 519 aaPredicted RBP12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 LRRC47Q8N1G4 583 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 RINT1Q6NUQ1 792 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 STK38LQ9Y2H1 464 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 SLC9C1Q4G0N8 1177 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 PPP2R3AQ06190 1150 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 METTL14Q9HCE5 456 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 NBPF11Q86T75 865 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 CXorf38Q8TB03 319 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 ATP6V1E2Q96A05 226 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 UHRF1BP1Q6BDS2 1440 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 TNNI3KQ59H18 835 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 MMTAG2Q9BU76 263 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 FPGT-TNNI3KV9GXZ4 949 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 SYNDIG1LA6NDD5 238 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 PAK1Q13153 545 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 HAUS8Q9BT25 410 aa12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-202ENST00000410080 M0R2C6 588 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 POLA2Q14181 598 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 SDCCAG3Q96C92 435 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 MAP3K19Q56UN5 1328 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 OCM2P0CE71 109 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 OCMP0CE72 109 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 STMN1P16949 149 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 CERKLQ49MI3 558 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 ANGPTL8Q6UXH0 198 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 HDXQ7Z353 690 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 PEX26Q7Z412 305 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 GDAP1Q8TB36 358 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 HACD3Q9P035 362 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 ARHGAP42A6NI28 874 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 IFT20Q8IY31 132 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 RAB20Q9NX57 234 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 SUFUQ9UMX1 484 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 RLBP1P12271 317 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 ELF1P32519 619 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 VPS41P49754 854 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 UVSSAQ2YD98 709 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 METTL22Q9BUU2 404 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 FIS1Q9Y3D6 152 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 CEP104O60308 925 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 TTC38Q5R3I4 469 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 LSM14BQ9BX40 385 aaKnown RBP12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 MAD1L1Q9Y6D9 718 aa12.33□□□□□ -0.44
PRPF40A-202ENST00000410080 VAMP4O75379 141 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 PHBP35232 272 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 ELMOD1Q8N336 334 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 MCUQ8NE86 351 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 PLCB1Q9NQ66 1216 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 GPAA1O43292 621 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 TMEM191BP0C7N4 346 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 WDR48Q8TAF3 677 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 NELFBQ8WX92 580 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 HESX1Q9UBX0 185 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 MAP3K7O43318 606 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 MARK3P27448 753 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 FAM160B1Q5W0V3 765 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 SYCE1Q8N0S2 351 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 BLZF1Q9H2G9 400 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 CLRN2A0PK11 232 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 ELMSAN1Q6PJG2 1045 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 CCDC13Q8IYE1 715 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 SLC12A6Q9UHW9 1150 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 TECP42680 631 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 TYW1BQ6NUM6 668 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 MAST1Q9Y2H9 1570 aa12.32□□□□□ -0.44
PRPF40A-202ENST00000410080 CERS3Q8IU89 383 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 TRIM37O94972 964 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PDZD4Q76G19 769 aaPredicted RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SLC27A2O14975 620 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 ATICP31939 592 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 TBCCQ15814 346 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SFMBT2Q5VUG0 894 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 GPBP1Q86WP2 473 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SPICE1Q8N0Z3 855 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 REXO1Q8N1G1 1221 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 CMTR1Q8N1G2 835 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 CHMLP26374 656 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 ANXA13P27216 316 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 POLR2BP30876 1174 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PARP10Q53GL7 1025 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms