RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SCARF1Q14162 830 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 TOGARAM2Q6ZUX3 1019 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 PPP1R42Q7Z4L9 355 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 UPF2Q9HAU5 1272 aaKnown RBP3.63□□□□□ -1.83
RGPD3-202ENST00000409886 IFT57Q9NWB7 429 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 ZBTB1Q9Y2K1 713 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 FOXO6A8MYZ6 492 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 SRGAP2O75044 1071 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 FNTAP49354 379 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 GTF2A2P52657 109 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 SLC10A5Q5PT55 438 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 NBPF5PQ86XG9 351 aaPredicted RBP3.63□□□□□ -1.83
RGPD3-202ENST00000409886 DNAJC10Q8IXB1 793 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 SMYD4Q8IYR2 804 aaPredicted RBP3.63□□□□□ -1.83
RGPD3-202ENST00000409886 SH2D3CQ8N5H7 860 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 STAMQ92783 540 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 BRF1Q92994 677 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 DRC1Q96MC2 740 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 EYA3Q99504 573 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 GGA3Q9NZ52 723 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 SLC45A1Q9Y2W3 748 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 GRIN2DO15399 1336 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 COL4A4P53420 1690 aaPredicted RBP3.63□□□□□ -1.83
RGPD3-202ENST00000409886 SCN9AQ15858 1988 aa3.63□□□□□ -1.83
RGPD3-202ENST00000409886 ERVV-1B6SEH8 477 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 MYO1FO00160 1098 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 RXRAP19793 462 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 CASTP20810 708 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 MCM6Q14566 821 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 KRBA2Q6ZNG9 492 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 DNAI1Q9UI46 699 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 ANGEL1Q9UNK9 670 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 FAN1Q9Y2M0 1017 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 ZNF804BA4D1E1 1349 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 TTC41PQ6P2S7 1318 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 IGF2BP3O00425 579 aaKnown RBP eCLIP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 ZNF263O14978 683 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 SYF2O95926 243 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 COL6A1P12109 1028 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 BMP1P13497 986 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 PUS10Q3MIT2 529 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 CDCA8Q53HL2 280 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 FAM200AQ8TCP9 573 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 CHP1Q99653 195 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 C11orf16Q9NQ32 467 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 SCP2P22307 547 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 SCRN1Q12765 414 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 RESTQ13127 1097 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 TC2NQ8N9U0 490 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 RPGRQ92834 1020 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 PPP1R13BQ96KQ4 1090 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 CDC5LQ99459 802 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 CCDC8Q9H0W5 538 aaPredicted RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 ZSCAN16Q9H4T2 348 aaPredicted RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 BCAS3Q9H6U6 928 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 PDE11AQ9HCR9 933 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 OGDHLQ9ULD0 1010 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 TPRP12270 2363 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 COL4A6Q14031 1691 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 ERC2O15083 957 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 UBE2HP62256 183 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 RSRC2Q7L4I2 434 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 C7orf61Q8IZ16 206 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 TDRD7Q8NHU6 1098 aaKnown RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 MYLIPQ8WY64 445 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 ERCC3P19447 782 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 SEC24CP53992 1094 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 NUCB2P80303 420 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 AOC3Q16853 763 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 C1orf141Q5JVX7 400 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 GAS2L1Q99501 681 aaPredicted RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 LBHD1Q9BQE6 289 aaPredicted RBP3.62□□□□□ -1.83
RGPD3-202ENST00000409886 PIDD1Q9HB75 910 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 CD248Q9HCU0 757 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 NUMBLQ9Y6R0 609 aa3.62□□□□□ -1.83
RGPD3-202ENST00000409886 EIF3CLB5ME19 914 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 RTN2O75298 545 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 IGKV5-2P06315 115 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 PTMAP06454 111 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ALADP13716 330 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 OAS2P29728 719 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ETF1P62495 437 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 BMP8AQ7Z5Y6 402 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 IRF2BP1Q8IU81 584 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 FMR1NBQ8N0W7 255 aaPredicted RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 CMTR1Q8N1G2 835 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 AOPEPQ8N6M6 819 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ZBED3Q96IU2 234 aaPredicted RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 EIF3CQ99613 913 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 TRIM5Q9C035 493 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 IFNKQ9P0W0 207 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 LNPEPQ9UIQ6 1025 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 CLIC4Q9Y696 253 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 AKAP13Q12802 2813 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ENC1O14682 589 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ZNF185O15231 689 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 KRT14P02533 472 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 CD44P16070 742 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 TUBP50607 506 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 CCT2P78371 535 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms