RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 TTYH3Q9C0H2 523 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 PUS7LQ9H0K6 701 aaKnown RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 GBP3Q9H0R5 595 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 PDE11AQ9HCR9 933 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 A1CFQ9NQ94 594 aaKnown RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 CWC25Q9NXE8 425 aaPredicted RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 HPCAL4Q9UM19 191 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 NFE2L3Q9Y4A8 694 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 RIPOR2Q9Y4F9 1068 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 MAFBQ9Y5Q3 323 aaPredicted RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 SPATA31A3Q5VYP0 1347 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 COL5A3P25940 1745 aaPredicted RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 A0A087X0B3 334 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 A0A0U1RQJ8 604 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 A0A1W2PQC6 194 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 LRRIQ3A6PVS8 624 aaPredicted RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 C3orf80F5H4A9 247 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 AGPSO00116 658 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 ZEB2O60315 1214 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 MMP14P50281 582 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 PIP4K2BP78356 416 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 SKOR1P84550 965 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 RBL2Q08999 1139 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 SCARF1Q14162 830 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 NPY5RQ15761 445 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 COBLL1Q53SF7 1204 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 ICE2Q659A1 982 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 PDXDC2PQ6P474 469 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 CNGA4Q8IV77 575 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 IFNL2Q8IZJ0 200 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 ZNF507Q8TCN5 953 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 CABLES1Q8TDN4 633 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 AENQ8WTP8 325 aaKnown RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 ATRIPQ8WXE1 791 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 DRC1Q96MC2 740 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 AIFM3Q96NN9 605 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 CLIC6Q96NY7 704 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 GSDMAQ96QA5 445 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 TRIM34Q9BYJ4 488 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 SENP2Q9HC62 589 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 HOOK1Q9UJC3 728 aaKnown RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 ANAPC4Q9UJX5 808 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 WWC3Q9ULE0 1092 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 GRIN2DO15399 1336 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 SOS2Q07890 1332 aaPredicted RBP3.56□□□□□ -1.84
CUL3-204ENST00000409777 PNPLA7Q6ZV29 1317 aa3.56□□□□□ -1.84
CUL3-204ENST00000409777 ANO9A1A5B4 782 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 MOXD2PA6NHM9 499 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 POLR3GO15318 223 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 TEX33O43247 280 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 GPAA1O43292 621 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 N4BP1O75113 896 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 ERLIN1O75477 346 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 EIF3JO75822 258 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 ATG7O95352 703 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 LCA5LO95447 670 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 RECKO95980 971 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 PCCAP05165 728 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 NDUFV2P19404 249 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FGFR2P21802 821 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 BRD2P25440 801 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 METAP2P50579 478 aaKnown RBP eCLIP3.55□□□□□ -1.84
CUL3-204ENST00000409777 ADKP55263 362 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 GRIN1Q05586 938 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 MLECQ14165 292 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 PPP2R5BQ15173 497 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FOXR1Q6PIV2 292 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CHST3Q7LGC8 479 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 EFCAB13Q8IY85 973 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CNNM3Q8NE01 707 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 STAG1Q8WVM7 1258 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 WASF1Q92558 559 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 NAPGQ99747 312 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 ALG2Q9H553 416 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 EPB41L4AQ9HCS5 686 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 SAMSN1Q9NSI8 373 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 ABHD10Q9NUJ1 306 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 RSPH14Q9UHP6 348 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 RWDD2AQ9UIY3 292 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 GGA2Q9UJY4 613 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FAN1Q9Y2M0 1017 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 RTL9Q8NET4 1388 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CDK5RAP2Q96SN8 1893 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 COL4A1P02462 1669 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 NHSQ6T4R5 1651 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CTAGE9A4FU28 777 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 EIF3CLB5ME19 914 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 RNF225M0QZC1 329 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 KIF5CO60282 957 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 PRLRP16471 622 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 ATP2B1P20020 1258 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 MCM3P25205 808 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 MARCKSP29966 332 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 ADORA1P30542 326 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 HNRNPH3P31942 346 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 MCAMP43121 646 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FXR1P51114 621 aaKnown RBP eCLIP3.55□□□□□ -1.84
CUL3-204ENST00000409777 TIMM10P62072 90 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 SEC23AQ15436 765 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 ZRSR1Q15695 479 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms