RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 MTMR7Q9Y216 660 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 KINO60870 393 aaKnown RBP16.16■□□□□ 0.18
LIMS2-206ENST00000409754 PDHBP11177 359 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 MARCKSP29966 332 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-206ENST00000409754 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 USP17L2Q6R6M4 530 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 FMR1NBQ8N0W7 255 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-206ENST00000409754 TRIM34Q9BYJ4 488 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 TMEM39BQ9GZU3 492 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 DEFB129Q9H1M3 183 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 CEP131Q9UPN4 1083 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 CUTAO60888 179 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 GOLGA8HP0CJ92 632 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 HTRA3P83110 453 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 RASA3Q14644 834 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 CERKLQ49MI3 558 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-206ENST00000409754 GALNT17Q6IS24 598 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 APOBEC3FQ8IUX4 373 aaKnown RBP16.16■□□□□ 0.18
LIMS2-206ENST00000409754 CCDC148Q8NFR7 591 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 PIBF1Q8WXW3 757 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 ANP32BQ92688 251 aaKnown RBP16.16■□□□□ 0.18
LIMS2-206ENST00000409754 CLIP2Q9UDT6 1046 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
LIMS2-206ENST00000409754 FZD1Q9UP38 647 aa16.16■□□□□ 0.18
LIMS2-206ENST00000409754 FAM237AA0A1B0GTK4 181 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 A0A1B0GVL5 298 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 USP17L5A8MUK1 530 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 MPHOSPH10O00566 681 aaKnown RBP16.15■□□□□ 0.18
LIMS2-206ENST00000409754 UVSSAQ2YD98 709 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 FKBP1CQ5VVH2 108 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 SULF1Q8IWU6 871 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 LRRC47Q8N1G4 583 aaKnown RBP16.15■□□□□ 0.18
LIMS2-206ENST00000409754 KRI1Q8N9T8 703 aaKnown RBP16.15■□□□□ 0.18
LIMS2-206ENST00000409754 DAGLBQ8NCG7 672 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 BARHL2Q9NY43 387 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 PCDHB6Q9Y5E3 794 aa16.15■□□□□ 0.18
LIMS2-206ENST00000409754 BAZ2BQ9UIF8 2168 aaKnown RBP16.14■□□□□ 0.17
LIMS2-206ENST00000409754 TRIM75PA6NK02 468 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 BMP15O95972 392 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 TRAPPC10P48553 1259 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 NDUFA8P51970 172 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
LIMS2-206ENST00000409754 WWC2Q6AWC2 1192 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 RASGRP2Q7LDG7 609 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 CKAP2LQ8IYA6 745 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 RNF214Q8ND24 703 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 GPKOWQ92917 476 aaPredicted RBP eCLIP16.14■□□□□ 0.17
LIMS2-206ENST00000409754 MKL1Q969V6 931 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 RRP36Q96EU6 259 aaKnown RBP16.14■□□□□ 0.17
LIMS2-206ENST00000409754 RIOX1Q9H6W3 641 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 NYAP2Q9P242 653 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 PCDHA4Q9UN74 947 aa16.14■□□□□ 0.17
LIMS2-206ENST00000409754 STXBP3O00186 592 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 MYO1BO43795 1136 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 TYRO3Q06418 890 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 EARS2Q5JPH6 523 aaKnown RBP16.13■□□□□ 0.17
LIMS2-206ENST00000409754 RESP18Q5W5W9 173 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 TMEM179Q6ZVK1 233 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 MOB2Q70IA6 237 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 CLEC10AQ8IUN9 316 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 FAM151AQ8WW52 585 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 KANSL2Q9H9L4 492 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 HPSEQ9Y251 543 aa16.13■□□□□ 0.17
LIMS2-206ENST00000409754 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 FAM196BA6NMK8 535 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 hCG_1984214I3L0E3 225 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 PFKFB1P16118 471 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 PTPREP23469 700 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 SHC4Q6S5L8 630 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 HEATR3Q7Z4Q2 680 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 FAM83AQ86UY5 434 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 ZNF713Q8N859 430 aaPredicted RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 CCDC12Q8WUD4 166 aaPredicted RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 SEC63Q9UGP8 760 aaKnown RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 HERC5Q9UII4 1024 aaKnown RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 M0R2N6 131 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 CELF2O95319 508 aaKnown RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 GPATCH4Q5T3I0 446 aaKnown RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 TYW1BQ6NUM6 668 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 SASS6Q6UVJ0 657 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 TIGD1Q96MW7 591 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 CSRNP1Q96S65 589 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 PPP1R9BQ96SB3 815 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 SRPRBQ9Y5M8 271 aaKnown RBP16.12■□□□□ 0.17
LIMS2-206ENST00000409754 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
LIMS2-206ENST00000409754 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-206ENST00000409754 ZNF202O95125 648 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 APLP1P51693 650 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 ABCB5Q2M3G0 1257 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 TTC38Q5R3I4 469 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 CLIC6Q96NY7 704 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 ZMYND12Q9H0C1 365 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms