RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 DNAJB2P25686 324 aa15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 STAT3P40763 770 aa15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 NUCB1Q02818 461 aa15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 FPGSQ05932 587 aa15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 UPF2Q9HAU5 1272 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 DIS3Q9Y2L1 958 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 RIPK3Q9Y572 518 aa15.19■□□□□ 0.02
CHRNA1-205ENST00000409542 TTC28Q96AY4 2481 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 GRXCR1A8MXD5 290 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 USP17L12C9JPN9 530 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 USP17L21D6R901 530 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 SEC24BO95487 1268 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 SNAI1O95863 264 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 AKR1A1P14550 325 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 ADD2P35612 726 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 FAM83BQ5T0W9 1011 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 CCSAPQ6IQ19 270 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 C16orf86Q6ZW13 317 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 C16orf59Q7L2K0 433 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 ANKRD33Q7Z3H0 272 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 KLHDC9Q8NEP7 349 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 NUP88Q99567 741 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 ATP8A2Q9NTI2 1148 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 CHD9Q3L8U1 2897 aa15.18■□□□□ 0.02
CHRNA1-205ENST00000409542 SYNRGQ9UMZ2 1314 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 TMEM265A0A087WTH1 108 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 ADCY6O43306 1168 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 RAD21O60216 631 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 ACLYP53396 1101 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 KCTD2Q14681 263 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 KCNA10Q16322 511 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 CCDC17Q96LX7 622 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 TBC1D32Q96NH3 1257 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 ZNF576Q9H609 170 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 ROBO3Q96MS0 1386 aa15.17■□□□□ 0.02
CHRNA1-205ENST00000409542 PBX2P40425 430 aa15.16■□□□□ 0.02
CHRNA1-205ENST00000409542 CTR9Q6PD62 1173 aa15.16■□□□□ 0.02
CHRNA1-205ENST00000409542 SIRT2Q8IXJ6 389 aa15.16■□□□□ 0.02
CHRNA1-205ENST00000409542 TOX2Q96NM4 488 aa15.16■□□□□ 0.02
CHRNA1-205ENST00000409542 TSEN34Q9BSV6 310 aaKnown RBP15.16■□□□□ 0.02
CHRNA1-205ENST00000409542 STARD7Q9NQZ5 370 aa15.16■□□□□ 0.02
CHRNA1-205ENST00000409542 PAG1Q9NWQ8 432 aa15.16■□□□□ 0.02
CHRNA1-205ENST00000409542 TIMP1P01033 207 aa15.15■□□□□ 0.02
CHRNA1-205ENST00000409542 CLASRPQ8N2M8 674 aaKnown RBP15.15■□□□□ 0.02
CHRNA1-205ENST00000409542 KANSL2Q9H9L4 492 aa15.15■□□□□ 0.02
CHRNA1-205ENST00000409542 TBX21Q9UL17 535 aa15.15■□□□□ 0.02
CHRNA1-205ENST00000409542 DNAJC25-GNG10A0A024R161 153 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 CDK7P50613 346 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 BECN1Q14457 450 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 HSP90AB4PQ58FF6 505 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 TMEM240Q5SV17 173 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 STK11IPQ8N1F8 1099 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 TIFAQ96CG3 184 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 KIF1BPQ96EK5 621 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 FGD4Q96M96 766 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 PUS7LQ9H0K6 701 aaKnown RBP15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 DCDC2CA8MYV0 355 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 ACRP10323 421 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 SLC4A3P48751 1232 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 TJAP1Q5JTD0 557 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 SNRNP48Q6IEG0 339 aaKnown RBP15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 MFSD5Q6N075 450 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 MAMDC4Q6UXC1 1216 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 NUP133Q8WUM0 1156 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 PPM1EQ8WY54 764 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 SYMPKQ92797 1274 aaKnown RBP15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 PBX4Q9BYU1 374 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 GOPCQ9HD26 462 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 FAM184BQ9ULE4 1060 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 SLC4A4Q9Y6R1 1079 aa15.14■□□□□ 0.01
CHRNA1-205ENST00000409542 MCM3APO60318 1980 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 GREB1LQ9C091 1923 aaPredicted RBP15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 REV3LO60673 3130 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 MOXD2PA6NHM9 499 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 ASGR1P07306 291 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 DEKP35659 375 aaKnown RBP15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 SLF1Q9BQI6 1058 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 PRDM12Q9H4Q4 367 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 CHD7Q9P2D1 2997 aa15.13■□□□□ 0.01
CHRNA1-205ENST00000409542 SYNGAP1Q96PV0 1343 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 DUSP11O75319 330 aaKnown RBP15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 CSF2RAP15509 400 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 ATP5JP18859 108 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 RASA1P20936 1047 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 ACVR2BQ13705 512 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 CPXCR1Q8N123 301 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms