RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 NEK8Q86SG6 692 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 SMC5Q8IY18 1101 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 ZNF713Q8N859 430 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-203ENST00000409101 ZNF830Q96NB3 372 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-203ENST00000409101 BCCIPQ9P287 314 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCN3A-203ENST00000409101 USP25Q9UHP3 1055 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 CDC42BPAQ5VT25 1732 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 CUTAO60888 179 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 SCG2P13521 617 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 KRT83P78385 493 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 KRT40Q6A162 431 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 C7orf31Q8N865 590 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 IPO4Q8TEX9 1081 aaKnown RBP5.58□□□□□ -1.52
SCN3A-203ENST00000409101 DCAF4Q8WV16 495 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 MTIF3Q9H2K0 278 aaKnown RBP5.58□□□□□ -1.52
SCN3A-203ENST00000409101 STIM2Q9P246 746 aa5.58□□□□□ -1.52
SCN3A-203ENST00000409101 ZMYM6O95789 1325 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 IQSEC2Q5JU85 1478 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 RNF17Q9BXT8 1623 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 E7EVH7 732 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 M0R2C6 588 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 URI1O94763 535 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 LMNB1P20700 586 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 SLC16A2P36021 539 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ARPP19P56211 112 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 SNAPC2Q13487 334 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ANO6Q4KMQ2 910 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 RNF207Q6ZRF8 634 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ELMOD1Q8N336 334 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 AOPEPQ8N6M6 819 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 FANCBQ8NB91 859 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 LINC00116Q8NCU8 138 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 TTLL11Q8NHH1 800 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 EDC3Q96F86 508 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CRAMP1Q96RY5 1269 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ANKFY1Q9P2R3 1169 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 TACC1O75410 805 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 KIF11P52732 1056 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 SCARF1Q14162 830 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ASIC2Q16515 512 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 SEL1L2Q5TEA6 688 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 LRCH2Q5VUJ6 765 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 DEFB132Q7Z7B7 95 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 GOLGA5Q8TBA6 731 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 EAF2Q96CJ1 260 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 NACC1Q96RE7 527 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CD209Q9NNX6 404 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 MINPP1Q9UNW1 487 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 AGLP35573 1532 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CEP152O94986 1710 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 TYW5A2RUC4 315 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L10C9JJH3 530 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 KIAA0754O94854 1291 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 SLU7O95391 586 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 HSPD1P10809 573 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CACNB3P54284 484 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 NELFCDQ8IXH7 590 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 GIMAP8Q8ND71 665 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 UBXN4Q92575 508 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CCDC42Q96M95 316 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 RIPOR2Q9Y4F9 1068 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 GH2P01242 217 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 TMEM191BP0C7N4 346 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 FCER1AP12319 257 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ATP2A2P16615 1042 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 PTGS1P23219 599 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ELF1P32519 619 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 TECP42680 631 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 TERF1P54274 439 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 GIMAP6Q6P9H5 292 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 NBPF11Q86T75 865 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CMTR1Q8N1G2 835 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 LCORLQ8N3X6 602 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 SH3RF3Q8TEJ3 882 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 IQCGQ9H095 443 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 FAM204AQ9H8W3 233 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 DACT1Q9NYF0 836 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 TXNDC16Q9P2K2 825 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 KCNH3Q9ULD8 1083 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ODF2LQ9ULJ1 636 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 PCDHA12Q9UN75 941 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CDHR2Q9BYE9 1310 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CAPN9O14815 690 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 BCRP11274 1271 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 PTPREP23469 700 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 ADD2P35612 726 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CDK8P49336 464 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 CKAP4Q07065 602 aaKnown RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 GABPB2Q8TAK5 448 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-203ENST00000409101 GSDMBQ8TAX9 411 aa5.57□□□□□ -1.52
SCN3A-203ENST00000409101 HUNKP57058 714 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 CDC37Q16543 378 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 INF2Q27J81 1249 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 C9orf131Q5VYM1 1079 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 DYNLL2Q96FJ2 89 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 ANXA13P27216 316 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 FAM83BQ5T0W9 1011 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 TMED8Q6PL24 325 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 MARCH10Q8NA82 808 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms