RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
COL23A1-202ENST00000407622 PNMA6AP0CW24 399 aaPredicted RBP18.73■□□□□ 0.59
COL23A1-202ENST00000407622 PPP2R3AQ06190 1150 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 GABPB1Q06547 395 aaPredicted RBP18.73■□□□□ 0.59
COL23A1-202ENST00000407622 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 GPR101Q96P66 508 aaPredicted RBP18.73■□□□□ 0.59
COL23A1-202ENST00000407622 VPS16Q9H269 839 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 ZPR1O75312 459 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 ZRANB2O95218 330 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL23A1-202ENST00000407622 KIF5BP33176 963 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 CCDC12Q8WUD4 166 aaPredicted RBP18.72■□□□□ 0.59
COL23A1-202ENST00000407622 NELFBQ8WX92 580 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 TMEM60Q9H2L4 133 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 TAB2Q9NYJ8 693 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 MAD2L2Q9UI95 211 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 CYTH3O43739 400 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 ABL1P00519 1130 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 RPN1P04843 607 aaKnown RBP18.72■□□□□ 0.59
COL23A1-202ENST00000407622 CREBRFQ8IUR6 639 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 FBXO41Q8TF61 875 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 PCDHA4Q9UN74 947 aa18.72■□□□□ 0.59
COL23A1-202ENST00000407622 M0R2N6 131 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 USP5P45974 858 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 PAK1Q13153 545 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 BMS1Q14692 1282 aaKnown RBP18.71■□□□□ 0.59
COL23A1-202ENST00000407622 FILIP1LQ4L180 1135 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 NAALADL2Q58DX5 795 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 TEX35Q5T0J7 233 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 WWC2Q6AWC2 1192 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 LIMA1Q9UHB6 759 aaKnown RBP18.71■□□□□ 0.59
COL23A1-202ENST00000407622 RWDD2AQ9UIY3 292 aa18.71■□□□□ 0.59
COL23A1-202ENST00000407622 TRIM49BA6NDI0 452 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 N4BP3O15049 544 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 PRCPP42785 496 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 PROM2Q8N271 834 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 ACRBPQ8NEB7 543 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 LRRC15Q8TF66 581 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 PLIN2Q99541 437 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 CPVLQ9H3G5 476 aa18.71■□□□□ 0.58
COL23A1-202ENST00000407622 CALML3P27482 149 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 PLA2G4AP47712 749 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 COPB1P53618 953 aaKnown RBP18.7■□□□□ 0.58
COL23A1-202ENST00000407622 ERVK-24P63145 666 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 GRM4Q14833 912 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 TERF2Q15554 542 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 ZNF658Q5TYW1 1059 aaPredicted RBP18.7■□□□□ 0.58
COL23A1-202ENST00000407622 ARL6IP4Q66PJ3 421 aaKnown RBP18.7■□□□□ 0.58
COL23A1-202ENST00000407622 TPTE2Q6XPS3 522 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 RSRC2Q7L4I2 434 aaKnown RBP18.7■□□□□ 0.58
COL23A1-202ENST00000407622 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 PCDHA6Q9UN73 950 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 PCDHA8Q9Y5H6 950 aa18.7■□□□□ 0.58
COL23A1-202ENST00000407622 LONP1P36776 959 aaKnown RBP18.69■□□□□ 0.58
COL23A1-202ENST00000407622 STAT6P42226 847 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 NFIXQ14938 502 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 INF2Q27J81 1249 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 NAA15Q9BXJ9 866 aaKnown RBP18.69■□□□□ 0.58
COL23A1-202ENST00000407622 ZSWIM4Q9H7M6 989 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 ITIH6Q6UXX5 1313 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 LRRC10BA6NIK2 292 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 LDHBP07195 334 aaKnown RBP18.69■□□□□ 0.58
COL23A1-202ENST00000407622 GOLGA8HP0CJ92 632 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 RFC4P35249 363 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 PMS1P54277 932 aaKnown RBP18.69■□□□□ 0.58
COL23A1-202ENST00000407622 KCNJ12Q14500 433 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 TCP11X2Q5H9J9 407 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 TMCO3Q6UWJ1 677 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 ZNF771Q7L3S4 317 aaPredicted RBP18.69■□□□□ 0.58
COL23A1-202ENST00000407622 TGFBRAP1Q8WUH2 860 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 DISC1Q9NRI5 854 aa18.69■□□□□ 0.58
COL23A1-202ENST00000407622 SAP30BPQ9UHR5 308 aaKnown RBP18.69■□□□□ 0.58
COL23A1-202ENST00000407622 TFRCP02786 760 aaKnown RBP18.68■□□□□ 0.58
COL23A1-202ENST00000407622 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 HEATR3Q7Z4Q2 680 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 IRF2BP1Q8IU81 584 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 CNGA4Q8IV77 575 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 MKNK2Q9HBH9 465 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 ANKIB1Q9P2G1 1089 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 FECHP22830 423 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 SPTY2D1Q68D10 685 aaPredicted RBP18.68■□□□□ 0.58
COL23A1-202ENST00000407622 SH3GLB2Q9NR46 395 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 ABHD10Q9NUJ1 306 aa18.68■□□□□ 0.58
COL23A1-202ENST00000407622 CCDC194A0A1B0GVG4 234 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 STXBP3O00186 592 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 TSPY3P0CV98 308 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 TSPY8P0CW00 308 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 MAPKAPK5Q8IW41 473 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 ANKS1AQ92625 1134 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 ARGLU1Q9NWB6 273 aaPredicted RBP18.67■□□□□ 0.58
COL23A1-202ENST00000407622 STX8Q9UNK0 236 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 ROBO3Q96MS0 1386 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.67■□□□□ 0.58
COL23A1-202ENST00000407622 SASH3O75995 380 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 ADRA2BP18089 450 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms