RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 SPATA9Q9BWV2 254 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 KDM2BQ8NHM5 1336 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 TMEM265A0A087WTH1 108 aa9.46□□□□□ -0.9
PTPN12-202ENST00000407343 FAM153BP0C7A2 387 aa9.46□□□□□ -0.9
PTPN12-202ENST00000407343 SQSTM1Q13501 440 aa9.46□□□□□ -0.9
PTPN12-202ENST00000407343 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
PTPN12-202ENST00000407343 ADAT2Q7Z6V5 191 aaKnown RBP9.46□□□□□ -0.9
PTPN12-202ENST00000407343 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
PTPN12-202ENST00000407343 TCTN2Q96GX1 697 aa9.46□□□□□ -0.9
PTPN12-202ENST00000407343 MCMBPQ9BTE3 642 aa9.46□□□□□ -0.9
PTPN12-202ENST00000407343 DIS3Q9Y2L1 958 aaKnown RBP9.46□□□□□ -0.9
PTPN12-202ENST00000407343 ESR1P03372 595 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 GRIA2P42262 883 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 CD97P48960 835 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 PPP2R2AP63151 447 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 C2orf27AQ580R0 203 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 NOL9Q5SY16 702 aaKnown RBP9.45□□□□□ -0.9
PTPN12-202ENST00000407343 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 CRTC3Q6UUV7 619 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 USHBP1Q8N6Y0 703 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 ZNF655Q8N720 491 aaPredicted RBP9.45□□□□□ -0.9
PTPN12-202ENST00000407343 SH3TC2Q8TF17 1288 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 UBE2FQ969M7 185 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 ATP13A1Q9HD20 1204 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 GPATCH2Q9NW75 528 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 ZSWIM5Q9P217 1185 aa9.45□□□□□ -0.9
PTPN12-202ENST00000407343 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-202ENST00000407343 ADAM23O75077 832 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 PRNPP04156 253 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 SPINK2P20155 84 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 TPP2P29144 1249 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-202ENST00000407343 PRKCQQ04759 706 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 GRB10Q13322 594 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 PPP2R5DQ14738 602 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 THAP3Q8WTV1 239 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-202ENST00000407343 TRIT1Q9H3H1 467 aaKnown RBP9.44□□□□□ -0.9
PTPN12-202ENST00000407343 AKT3Q9Y243 479 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 SUGT1Q9Y2Z0 365 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
PTPN12-202ENST00000407343 KIAA1324LA8MWY0 1029 aaPredicted RBP9.43□□□□□ -0.9
PTPN12-202ENST00000407343 MEIS1O00470 390 aa9.43□□□□□ -0.9
PTPN12-202ENST00000407343 CD96P40200 585 aa9.43□□□□□ -0.9
PTPN12-202ENST00000407343 YOD1Q5VVQ6 348 aaPredicted RBP9.43□□□□□ -0.9
PTPN12-202ENST00000407343 DTX1Q86Y01 620 aa9.43□□□□□ -0.9
PTPN12-202ENST00000407343 ZBTB38Q8NAP3 1195 aaPredicted RBP9.43□□□□□ -0.9
PTPN12-202ENST00000407343 ZDHHC15Q96MV8 337 aa9.43□□□□□ -0.9
PTPN12-202ENST00000407343 ZNF281Q9Y2X9 895 aa9.43□□□□□ -0.9
PTPN12-202ENST00000407343 IQCA1LA6NCM1 817 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 GSNP06396 782 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 BMP8BP34820 402 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 INTS5Q6P9B9 1019 aaKnown RBP9.42□□□□□ -0.9
PTPN12-202ENST00000407343 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 LRRC47Q8N1G4 583 aaKnown RBP9.42□□□□□ -0.9
PTPN12-202ENST00000407343 BCL7CQ8WUZ0 217 aaPredicted RBP9.42□□□□□ -0.9
PTPN12-202ENST00000407343 BTN2A2Q8WVV5 523 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 DSCC1Q9BVC3 393 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 ASCC2Q9H1I8 757 aaPredicted RBP9.42□□□□□ -0.9
PTPN12-202ENST00000407343 TMEM260Q9NX78 707 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 VAV3Q9UKW4 847 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 PTCH2Q9Y6C5 1203 aa9.42□□□□□ -0.9
PTPN12-202ENST00000407343 COBLO75128 1261 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 VAMP4O75379 141 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 ZNF205O95201 554 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 KCNH1O95259 989 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 BNIP3Q12983 259 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 SF1Q15637 639 aaKnown RBP9.41□□□□□ -0.9
PTPN12-202ENST00000407343 AOC3Q16853 763 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 LONRF2Q1L5Z9 754 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 CLEC16AQ2KHT3 1053 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 RTP2Q5QGT7 225 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 SDE2Q6IQ49 451 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 TMPRSS7Q7RTY8 843 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 SPRED2Q7Z698 418 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 LINC00116Q8NCU8 138 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 EXOC2Q96KP1 924 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 SLC12A9Q9BXP2 914 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 NKX2-4Q9H2Z4 354 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
PTPN12-202ENST00000407343 SF3B6Q9Y3B4 125 aaKnown RBP9.41□□□□□ -0.9
PTPN12-202ENST00000407343 PCDHA11Q9Y5I1 949 aa9.41□□□□□ -0.9
PTPN12-202ENST00000407343 ENPP3O14638 875 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 VAV1P15498 845 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 CEBPAP49715 358 aaPredicted RBP9.4□□□□□ -0.9
PTPN12-202ENST00000407343 TEKQ02763 1124 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 OSBP2Q969R2 916 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 PPP1R14AQ96A00 147 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 MISP3Q96FF7 219 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 C1orf159Q96HA4 380 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 DUSP13Q9UII6 198 aa9.4□□□□□ -0.9
PTPN12-202ENST00000407343 TMA7Q9Y2S6 64 aaKnown RBP9.4□□□□□ -0.9
PTPN12-202ENST00000407343 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
PTPN12-202ENST00000407343 TMEM82A0PJX8 343 aa9.39□□□□□ -0.91
PTPN12-202ENST00000407343 ADAMTS4O75173 837 aa9.39□□□□□ -0.91
PTPN12-202ENST00000407343 GRIK1P39086 918 aa9.39□□□□□ -0.91
PTPN12-202ENST00000407343 POMZP3Q6PJE2 187 aa9.39□□□□□ -0.91
PTPN12-202ENST00000407343 ZNF574Q6ZN55 896 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-202ENST00000407343 KISS1RQ969F8 398 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-202ENST00000407343 FCRL3Q96P31 734 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms