RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 SASH1O94885 1247 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 BRD1O95696 1058 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 LMNB1P20700 586 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 YWHAEP62258 255 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 RETREG2Q8NC44 543 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 KIFAP3Q92845 792 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 CCDC42Q96M95 316 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 ANO1Q5XXA6 986 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 WRNIP1Q96S55 665 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 GADD45BO75293 160 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 KIF5AQ12840 1032 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 DPH6Q7L8W6 267 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 METTL13Q8N6R0 699 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 XPOTO43592 962 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 HSPD1P10809 573 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 TTC16Q8NEE8 873 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 KRT86O43790 486 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 ATF7P17544 494 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 ADD2P35612 726 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 USP17L2Q6R6M4 530 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 LRFN2Q9ULH4 789 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 CCND2P30279 289 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 CHRNA5P30532 468 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 MFSD14CQ5VZR4 134 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 PLA2G4DQ86XP0 818 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 RASAL2Q9UJF2 1139 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZNF75DP51815 510 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZNF569Q5MCW4 686 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 STRIP1Q5VSL9 837 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 SLC17A8Q8NDX2 589 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 KCNH4Q9UQ05 1017 aa13.06□□□□□ -0.32
RAPGEF3-204ENST00000405493 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 GDF11O95390 407 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 NEXMIFQ5QGS0 1516 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 ARHGEF37A1IGU5 675 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 EEF2P13639 858 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 ABCD1P33897 745 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 MYL5Q02045 173 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 MECOMQ03112 1051 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 FAM173BQ6P4H8 233 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 LMBR1Q8WVP7 490 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 COMMD10Q9Y6G5 202 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 MIGA2Q7L4E1 593 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 TSC1Q92574 1164 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 HAUS2Q9NVX0 235 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 CETN3O15182 167 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 CCDC155Q8N6L0 562 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 PHKBQ93100 1093 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 HERC5Q9UII4 1024 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 IKBKGQ9Y6K9 419 aa13.05□□□□□ -0.32
RAPGEF3-204ENST00000405493 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 NACA2Q9H009 215 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 CNOT7Q9UIV1 285 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 PALD1Q9ULE6 856 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 MST1RQ04912 1400 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 CUTAO60888 179 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 FGAP02671 866 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 SCG2P13521 617 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 TTC14Q96N46 770 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 VPS18Q9P253 973 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZHX2Q9Y6X8 837 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 TUBBP07437 444 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 GPSM2P81274 684 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 SREBF2Q12772 1141 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 RAPGEF1Q13905 1077 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 UTP14CQ5TAP6 766 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 GNAT1P11488 350 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 EVCP57679 992 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 RBM46Q8TBY0 533 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-204ENST00000405493 A0A1W2PRG0 241 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 DPEP1P16444 411 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 GSTA5Q7RTV2 222 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms