RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 GDF11O95390 407 aa24.21■■□□□ 1.47
TPM1-208ENST00000404484 SEPT2Q15019 361 aa24.21■■□□□ 1.47
TPM1-208ENST00000404484 GPATCH4Q5T3I0 446 aaKnown RBP24.21■■□□□ 1.47
TPM1-208ENST00000404484 GDPD2Q9HCC8 539 aa24.21■■□□□ 1.47
TPM1-208ENST00000404484 GJB4Q9NTQ9 266 aa24.21■■□□□ 1.47
TPM1-208ENST00000404484 ZNF112Q9UJU3 913 aa24.21■■□□□ 1.47
TPM1-208ENST00000404484 GH2P01242 217 aa24.2■■□□□ 1.47
TPM1-208ENST00000404484 EEF2P13639 858 aaKnown RBP24.2■■□□□ 1.47
TPM1-208ENST00000404484 GJA5P36382 358 aa24.2■■□□□ 1.47
TPM1-208ENST00000404484 FAM173BQ6P4H8 233 aa24.2■■□□□ 1.47
TPM1-208ENST00000404484 CLEC10AQ8IUN9 316 aa24.2■■□□□ 1.47
TPM1-208ENST00000404484 BRMS1Q9HCU9 246 aa24.2■■□□□ 1.47
TPM1-208ENST00000404484 CSADQ9Y600 493 aa24.2■■□□□ 1.47
TPM1-208ENST00000404484 USP17L5A8MUK1 530 aa24.2■■□□□ 1.46
TPM1-208ENST00000404484 U2AF2P26368 475 aaKnown RBP eCLIP24.2■■□□□ 1.464e-8■■■■■ 35.5
TPM1-208ENST00000404484 INPP5BP32019 993 aa24.2■■□□□ 1.46
TPM1-208ENST00000404484 USP17L2Q6R6M4 530 aa24.2■■□□□ 1.46
TPM1-208ENST00000404484 DCAF4Q8WV16 495 aa24.2■■□□□ 1.46
TPM1-208ENST00000404484 CNKSR2Q8WXI2 1034 aa24.2■■□□□ 1.46
TPM1-208ENST00000404484 SPATA32Q96LK8 384 aa24.2■■□□□ 1.46
TPM1-208ENST00000404484 FOXP1Q9H334 677 aaPredicted RBP24.2■■□□□ 1.46
TPM1-208ENST00000404484 SH3GLB2Q9NR46 395 aa24.2■■□□□ 1.46
TPM1-208ENST00000404484 ZBTB48P10074 688 aaPredicted RBP24.19■■□□□ 1.46
TPM1-208ENST00000404484 UBE2HP62256 183 aa24.19■■□□□ 1.46
TPM1-208ENST00000404484 REM2Q8IYK8 340 aaPredicted RBP24.19■■□□□ 1.46
TPM1-208ENST00000404484 OPTNQ96CV9 577 aa24.19■■□□□ 1.46
TPM1-208ENST00000404484 GINM1Q9NU53 330 aa24.19■■□□□ 1.46
TPM1-208ENST00000404484 PHF20L1A8MW92 1017 aa24.18■■□□□ 1.46
TPM1-208ENST00000404484 TM4SF4P48230 202 aa24.18■■□□□ 1.46
TPM1-208ENST00000404484 CTCFP49711 727 aaPredicted RBP24.18■■□□□ 1.46
TPM1-208ENST00000404484 ZNF543Q08ER8 600 aa24.18■■□□□ 1.46
TPM1-208ENST00000404484 DIS3L2Q8IYB7 885 aaKnown RBP24.18■■□□□ 1.46
TPM1-208ENST00000404484 RRP36Q96EU6 259 aaKnown RBP24.18■■□□□ 1.46
TPM1-208ENST00000404484 ARHGEF10LQ9HCE6 1279 aa24.18■■□□□ 1.46
TPM1-208ENST00000404484 TSKSQ9UJT2 592 aa24.18■■□□□ 1.46
TPM1-208ENST00000404484 ZBTB21Q9ULJ3 1066 aa24.18■■□□□ 1.46
TPM1-208ENST00000404484 SNCAIPQ9Y6H5 919 aa24.18■■□□□ 1.46
TPM1-208ENST00000404484 GOLGA8HP0CJ92 632 aa24.17■■□□□ 1.46
TPM1-208ENST00000404484 MYSM1Q5VVJ2 828 aa24.17■■□□□ 1.46
TPM1-208ENST00000404484 GMCL1P1Q8NEA9 526 aa24.17■■□□□ 1.46
TPM1-208ENST00000404484 PHF20Q9BVI0 1012 aa24.17■■□□□ 1.46
TPM1-208ENST00000404484 RNF186Q9NXI6 227 aa24.17■■□□□ 1.46
TPM1-208ENST00000404484 VPS54Q9P1Q0 977 aa24.17■■□□□ 1.46
TPM1-208ENST00000404484 TFIP11Q9UBB9 837 aaKnown RBP24.17■■□□□ 1.46
TPM1-208ENST00000404484 SEC63Q9UGP8 760 aaKnown RBP24.17■■□□□ 1.46
TPM1-208ENST00000404484 OTOFQ9HC10 1997 aa24.17■■□□□ 1.46
TPM1-208ENST00000404484 KIF28PB7ZC32 967 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 HSPA8P11142 646 aaKnown RBP24.16■■□□□ 1.46
TPM1-208ENST00000404484 CALML3P27482 149 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 LBX1P52954 281 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 CCDC148Q8NFR7 591 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 LEO1Q8WVC0 666 aaPredicted RBP24.16■■□□□ 1.46
TPM1-208ENST00000404484 SH2D4AQ9H788 454 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 KCNJ14Q9UNX9 436 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 hCG_1642624A0A1W2PR95 340 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 CA12O43570 354 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 ASNSP08243 561 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 KRT2P35908 639 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 CAP2P40123 477 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 RRP1BQ14684 758 aaKnown RBP24.16■■□□□ 1.46
TPM1-208ENST00000404484 CCDC96Q2M329 555 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 NOSTRINQ8IVI9 506 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 CCDC12Q8WUD4 166 aaPredicted RBP24.16■■□□□ 1.46
TPM1-208ENST00000404484 RIOX1Q9H6W3 641 aa24.16■■□□□ 1.46
TPM1-208ENST00000404484 hCG_1984214I3L0E3 225 aa24.15■■□□□ 1.46
TPM1-208ENST00000404484 CYTH3O43739 400 aa24.15■■□□□ 1.46
TPM1-208ENST00000404484 TRPA1O75762 1119 aa24.15■■□□□ 1.46
TPM1-208ENST00000404484 SLFN13Q68D06 897 aa24.15■■□□□ 1.46
TPM1-208ENST00000404484 ZNF713Q8N859 430 aaPredicted RBP24.15■■□□□ 1.46
TPM1-208ENST00000404484 RTEL1Q9NZ71 1219 aa24.15■■□□□ 1.46
TPM1-208ENST00000404484 RCOR1Q9UKL0 485 aa24.15■■□□□ 1.46
TPM1-208ENST00000404484 FRMPD2Q68DX3 1309 aaPredicted RBP24.14■■□□□ 1.46
TPM1-208ENST00000404484 MANSC4A6NHS7 340 aaPredicted RBP24.14■■□□□ 1.45
TPM1-208ENST00000404484 SPDYE5A6NIY4 337 aa24.14■■□□□ 1.45
TPM1-208ENST00000404484 SHROOM1Q2M3G4 852 aaPredicted RBP24.14■■□□□ 1.45
TPM1-208ENST00000404484 GALNT17Q6IS24 598 aa24.14■■□□□ 1.45
TPM1-208ENST00000404484 ERO1BQ86YB8 467 aa24.14■■□□□ 1.45
TPM1-208ENST00000404484 OTUD5Q96G74 571 aa24.14■■□□□ 1.45
TPM1-208ENST00000404484 GMCL1Q96IK5 515 aa24.14■■□□□ 1.45
TPM1-208ENST00000404484 USP28Q96RU2 1077 aa24.14■■□□□ 1.45
TPM1-208ENST00000404484 POLR3EQ9NVU0 708 aa24.14■■□□□ 1.45
TPM1-208ENST00000404484 GOLGA6L4A6NEF3 574 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 YEATS4O95619 227 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 SLC1A4P43007 532 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 NLRP5P59047 1200 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 SREBF2Q12772 1141 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 RASGRP2Q7LDG7 609 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 SIAH1Q8IUQ4 282 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 GPT2Q8TD30 523 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 PIBF1Q8WXW3 757 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 MS4A4AQ96JQ5 239 aa24.13■■□□□ 1.45
TPM1-208ENST00000404484 BAZ2BQ9UIF8 2168 aaKnown RBP24.13■■□□□ 1.45
TPM1-208ENST00000404484 BTBD18B2RXH4 712 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 INHBEP58166 350 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 JAG1P78504 1218 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 SLC35G1Q2M3R5 365 aa24.12■■□□□ 1.45
TPM1-208ENST00000404484 NOL9Q5SY16 702 aaKnown RBP24.12■■□□□ 1.45
TPM1-208ENST00000404484 COL13A1Q5TAT6 717 aaPredicted RBP24.12■■□□□ 1.45
TPM1-208ENST00000404484 SYAP1Q96A49 352 aaPredicted RBP24.12■■□□□ 1.45
TPM1-208ENST00000404484 GOPCQ9HD26 462 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms