RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CLCN7P51798 805 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 MSMPQ1L6U9 139 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 CRTC3Q6UUV7 619 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 TSPYL5Q86VY4 417 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 BVESQ8NE79 360 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 EPN3Q9H201 632 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 ATP13A1Q9HD20 1204 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 GPATCH2Q9NW75 528 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 PITPNM2Q9BZ72 1349 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 A0A087WZG4 1122 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 VAMP4O75379 141 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 KCNH1O95259 989 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 BNIP3Q12983 259 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 ARHGEF39Q8N4T4 335 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 TCTN2Q96GX1 697 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 MRGPRX3Q96LB0 322 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 RNPC3Q96LT9 517 aaKnown RBP7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 SPATA9Q9BWV2 254 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 PRR13Q9NZ81 148 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 EMC9Q9Y3B6 208 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 TBX22Q9Y458 520 aa7.39□□□□□ -1.23
HMGB3P19-201ENST00000403971 ADCY3O60266 1144 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 SSTR4P31391 388 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 GRIA2P42262 883 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 AOC3Q16853 763 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 GAB4Q2WGN9 574 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 NLGN1Q8N2Q7 840 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 DAGLBQ8NCG7 672 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 ENOX1Q8TC92 643 aaKnown RBP7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 BTN2A2Q8WVV5 523 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 ZNF669Q96BR6 464 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 RCC1LQ96I51 464 aaKnown RBP7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 HRASLS5Q96KN8 279 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 TRIT1Q9H3H1 467 aaKnown RBP7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 ARHGEF4Q9NR80 690 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 RNF112Q9ULX5 631 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 SNX11Q9Y5W9 270 aa7.38□□□□□ -1.23
HMGB3P19-201ENST00000403971 TLDC2A0PJX2 215 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 AGRPO00253 132 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 NOP56O00567 594 aaKnown RBP7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 GRIK1P39086 918 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 PPP2R2AP63151 447 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 DPY19L1Q2PZI1 675 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 YOD1Q5VVQ6 348 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 THAP5Q7Z6K1 395 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 CREG2Q8IUH2 290 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 TRIM59Q8IWR1 403 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 ZNF655Q8N720 491 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 MCMBPQ9BTE3 642 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 DUSP13Q9UII6 198 aa7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 GPR55Q9Y2T6 319 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P19-201ENST00000403971 IQCA1LA6NCM1 817 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 COBLO75128 1261 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 PRKCQQ04759 706 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 SQSTM1Q13501 440 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 SF1Q15637 639 aaKnown RBP7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 FOXB2Q5VYV0 432 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 LRRC47Q8N1G4 583 aaKnown RBP7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 USHBP1Q8N6Y0 703 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 FOXP3Q9BZS1 431 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 SF3B6Q9Y3B4 125 aaKnown RBP7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 PCDHA11Q9Y5I1 949 aa7.36□□□□□ -1.23
HMGB3P19-201ENST00000403971 FKTNO75072 461 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 ADAM23O75077 832 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 ESR1P03372 595 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 GSNP06396 782 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 CD3EP07766 207 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 SYPP08247 313 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 C2orf27AQ580R0 203 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 CWF19L1Q69YN2 538 aaKnown RBP7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 INTS5Q6P9B9 1019 aaKnown RBP7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 SPRED2Q7Z698 418 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 WFDC3Q8IUB2 231 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 THAP3Q8WTV1 239 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 BCL7CQ8WUZ0 217 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 BSDC1Q9NW68 430 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 VAV3Q9UKW4 847 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 PTCH2Q9Y6C5 1203 aa7.35□□□□□ -1.23
HMGB3P19-201ENST00000403971 ESYT3A0FGR9 886 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 STXBP3O00186 592 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 CAPNS1P04632 268 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 IFNGR1P15260 489 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 VAV1P15498 845 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 LTKP29376 864 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 CD97P48960 835 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 AMPD2Q01433 879 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 IKZF1Q13422 519 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 HSP90AA2PQ14568 343 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 POMZP3Q6PJE2 187 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 ZPBP2Q6X784 338 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms