RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 ADAMTS3O15072 1205 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 ATP2B1P20020 1258 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 SLC16A2P36021 539 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 NAPAP54920 295 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 FSIP1Q8NA03 581 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 GMCL1Q96IK5 515 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 GOLPH3LQ9H4A5 285 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 ARHGEF10LQ9HCE6 1279 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 NOL7Q9UMY1 257 aaKnown RBP15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 M0R2N6 131 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 NDUFB10O96000 172 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 CMA1P23946 247 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 CCDC73Q6ZRK6 1079 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 ENGASEQ8NFI3 743 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 MRPS27Q92552 414 aaKnown RBP15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 MTMR8Q96EF0 704 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 NUP62CLQ9H1M0 184 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 CEP131Q9UPN4 1083 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 TMX2Q9Y320 296 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 SMCO2A6NFE2 343 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 PHF20L1A8MW92 1017 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 GNA11P29992 359 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 EPS15P42566 896 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 TRAPPC10P48553 1259 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 MRE11P49959 708 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 FAM160A1Q05DH4 1040 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 SNW1Q13573 536 aaKnown RBP15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 ACER1Q8TDN7 264 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 CLSTN2Q9H4D0 955 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 C6orf50Q9HD87 102 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 RNF181Q9P0P0 153 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 PCDHA6Q9UN73 950 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 PCDHA8Q9Y5H6 950 aa15.24■□□□□ 0.03
CEACAM1-206ENST00000403136 USP17L10C9JJH3 530 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 ZBTB5O15062 677 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 CUTAO60888 179 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 DDNO94850 711 aaPredicted RBP15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 ASNSP08243 561 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 ECE1P42892 770 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 CAMK4Q16566 473 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 ANGEL2Q5VTE6 544 aaKnown RBP15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 TRPM4Q8TD43 1214 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 GRPEL1Q9HAV7 217 aa15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 MORC2Q9Y6X9 1032 aaPredicted RBP15.23■□□□□ 0.03
CEACAM1-206ENST00000403136 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 ESYT2A0FGR8 921 aa15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 BMP3P12645 472 aa15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 PTPREP23469 700 aa15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 HIRAP54198 1017 aaPredicted RBP15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 TTC38Q5R3I4 469 aa15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 NBPF12Q5TAG4 269 aaPredicted RBP15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 APOBEC3FQ8IUX4 373 aaKnown RBP15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 KRI1Q8N9T8 703 aaKnown RBP15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 COA7Q96BR5 231 aa15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
CEACAM1-206ENST00000403136 CCDC194A0A1B0GVG4 234 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 BMP15O95972 392 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 NDUFA8P51970 172 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 ZNF174Q15697 407 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 FMR1NBQ8N0W7 255 aaPredicted RBP15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 RASGRP4Q8TDF6 673 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 CLIC6Q96NY7 704 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 NUP88Q99567 741 aaPredicted RBP15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 GINM1Q9NU53 330 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 SRPRBQ9Y5M8 271 aaKnown RBP15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 MYH4Q9Y623 1939 aa15.21■□□□□ 0.03
CEACAM1-206ENST00000403136 TMEM232C9JQI7 657 aa15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 PPP1R11O60927 126 aaPredicted RBP15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 MAP3K11Q16584 847 aa15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 SHC4Q6S5L8 630 aa15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 BTNL9Q6UXG8 535 aa15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 TSPY26PQ9H489 355 aa15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 GOPCQ9HD26 462 aa15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 FBXO2Q9UK22 296 aaPredicted RBP15.21■□□□□ 0.02
CEACAM1-206ENST00000403136 FAM237AA0A1B0GTK4 181 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 WNT7AO00755 349 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 KINO60870 393 aaKnown RBP15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 KIAA1755Q5JYT7 1200 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 PPP1R18Q6NYC8 613 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 HOOK2Q96ED9 719 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 RBSNQ9H1K0 784 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 SH2D4AQ9H788 454 aa15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.2■□□□□ 0.02
CEACAM1-206ENST00000403136 CTAGE5O15320 804 aa15.19■□□□□ 0.02
CEACAM1-206ENST00000403136 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
CEACAM1-206ENST00000403136 SYDE2Q5VT97 1194 aa15.19■□□□□ 0.02
CEACAM1-206ENST00000403136 RESP18Q5W5W9 173 aa15.19■□□□□ 0.02
CEACAM1-206ENST00000403136 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
CEACAM1-206ENST00000403136 KRT25Q7Z3Z0 450 aa15.19■□□□□ 0.02
CEACAM1-206ENST00000403136 ZNF579Q8NAF0 562 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms