RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 TECP42680 631 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 ATP2C1P98194 919 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 PDE4DQ08499 809 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 IKQ13123 557 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 MCM6Q14566 821 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 KRT31Q15323 416 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 CAGE1Q8TC20 777 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 PCDHA4Q9UN74 947 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 PHLPP2Q6ZVD8 1323 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 AKAP11Q9UKA4 1901 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 NWD2Q9ULI1 1742 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 FAM237AA0A1B0GTK4 181 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 CTAGE9A4FU28 777 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 UBAP1LF5GYI3 381 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 BTDP43251 543 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 SARSP49591 514 aaKnown RBP8.65□□□□□ -1.03
HDAC9-201ENST00000401921 COPB1P53618 953 aaKnown RBP8.65□□□□□ -1.03
HDAC9-201ENST00000401921 NR1I3Q14994 352 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 CCDC96Q2M329 555 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 MFSD14BQ5SR56 506 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 SLC51AQ86UW1 340 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.03
HDAC9-201ENST00000401921 GOLGA1Q92805 767 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 RRP36Q96EU6 259 aaKnown RBP8.65□□□□□ -1.03
HDAC9-201ENST00000401921 CALML4Q96GE6 196 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 C6orf50Q9HD87 102 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 LUC7L2Q9Y383 392 aaKnown RBP8.65□□□□□ -1.03
HDAC9-201ENST00000401921 FRMPD2Q68DX3 1309 aaPredicted RBP8.65□□□□□ -1.03
HDAC9-201ENST00000401921 ABCC6O95255 1503 aa8.65□□□□□ -1.03
HDAC9-201ENST00000401921 PRCPP42785 496 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 RBM5P52756 815 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDAC9-201ENST00000401921 DPYDQ12882 1025 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 RASGRP2Q7LDG7 609 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 DYMQ7RTS9 669 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 CABP7Q86V35 215 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 FCHSD1Q86WN1 690 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 CSGALNACT2Q8N6G5 542 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 ZNF384Q8TF68 577 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 DEF6Q9H4E7 631 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 MRPL44Q9H9J2 332 aaKnown RBP8.64□□□□□ -1.03
HDAC9-201ENST00000401921 ZNF219Q9P2Y4 722 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-201ENST00000401921 ORC4O43929 436 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 TOM1O60784 492 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 TNNI2P48788 182 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 FXR1P51114 621 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDAC9-201ENST00000401921 TBC1D8BQ0IIM8 1120 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
HDAC9-201ENST00000401921 TMEM47Q9BQJ4 181 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 NUP188Q5SRE5 1749 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 NUP98P52948 1817 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 MYH7P12883 1935 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 SPATA31A5Q5VU36 1347 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 SPATA31A7Q8IWB4 1347 aa8.64□□□□□ -1.03
HDAC9-201ENST00000401921 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 EFCAB8A8MWE9 144 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 ZNF18P17022 549 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 CAPN2P17655 700 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 LONP1P36776 959 aaKnown RBP8.63□□□□□ -1.03
HDAC9-201ENST00000401921 TRAPPC10P48553 1259 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 CHMP4BP1P59074 171 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 GTF2IP78347 998 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 NONOQ15233 471 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC9-201ENST00000401921 C12orf60Q5U649 245 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 TRIM65Q6PJ69 517 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 RAD9BQ6WBX8 426 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 LRRC47Q8N1G4 583 aaKnown RBP8.63□□□□□ -1.03
HDAC9-201ENST00000401921 SLC35F6Q8N357 371 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 SHISA4Q96DD7 197 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 CAPZA3Q96KX2 299 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 TMEM60Q9H2L4 133 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 XDHP47989 1333 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 PPP1R3GB7ZBB8 358 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 ADAMTS3O15072 1205 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 GNA11P29992 359 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 GPS2Q13227 327 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 ZNF658Q5TYW1 1059 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-201ENST00000401921 DGKHQ86XP1 1220 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 DRC1Q96MC2 740 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 L2HGDHQ9H9P8 463 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 ADD3Q9UEY8 706 aaKnown RBP8.63□□□□□ -1.03
HDAC9-201ENST00000401921 FAM205AQ6ZU69 1335 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 A0A0U1RQJ8 604 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 MFAP3LO75121 409 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 KRT18P05783 430 aaKnown RBP8.63□□□□□ -1.03
HDAC9-201ENST00000401921 KCNJ6P48051 423 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 DNA2P51530 1060 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 FUT2Q10981 343 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 CYP26C1Q6V0L0 522 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 TMTC1Q8IUR5 882 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 ATRIPQ8WXE1 791 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 DISC1Q9NRI5 854 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 USP21Q9UK80 565 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 ADGRG1Q9Y653 693 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 PARP3Q9Y6F1 533 aa8.63□□□□□ -1.03
HDAC9-201ENST00000401921 CTAGE15A4D2H0 777 aa8.62□□□□□ -1.03
HDAC9-201ENST00000401921 ENC1O14682 589 aa8.62□□□□□ -1.03
HDAC9-201ENST00000401921 CTAGE8P0CG41 777 aa8.62□□□□□ -1.03
HDAC9-201ENST00000401921 FAM193AP78312 1265 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms