RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ARFGEF1Q9Y6D6 1849 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 CCDC194A0A1B0GVG4 234 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 SARSP49591 514 aaKnown RBP13.99□□□□□ -0.17
CLIP4-203ENST00000401617 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
CLIP4-203ENST00000401617 IL17AQ16552 155 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 CERKLQ49MI3 558 aaPredicted RBP13.99□□□□□ -0.17
CLIP4-203ENST00000401617 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
CLIP4-203ENST00000401617 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 SPATA20Q8TB22 786 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 MTMR8Q96EF0 704 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 SEC63Q9UGP8 760 aaKnown RBP13.99□□□□□ -0.17
CLIP4-203ENST00000401617 PCDHA5Q9Y5H7 936 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 FRMPD2Q68DX3 1309 aaPredicted RBP13.98□□□□□ -0.17
CLIP4-203ENST00000401617 A0A087X0B3 334 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 BECN2A8MW95 431 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 PSMD14O00487 310 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
CLIP4-203ENST00000401617 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 GNA11P29992 359 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 CDC25BP30305 580 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 NAPAP54920 295 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
CLIP4-203ENST00000401617 LARGE2Q8N3Y3 721 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
CLIP4-203ENST00000401617 EPSTI1Q96J88 318 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 C6orf50Q9HD87 102 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 ZNF277Q9NRM2 450 aaPredicted RBP13.98□□□□□ -0.17
CLIP4-203ENST00000401617 SMCO2A6NFE2 343 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 BIN1O00499 593 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 FOXN1O15353 648 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
CLIP4-203ENST00000401617 MCM7P33993 719 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 NCAPHQ15003 741 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 POSTNQ15063 836 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 KRT25Q7Z3Z0 450 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 SIAH1Q8IUQ4 282 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 AOPEPQ8N6M6 819 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
CLIP4-203ENST00000401617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLIP4-203ENST00000401617 MPHOSPH10O00566 681 aaKnown RBP13.97□□□□□ -0.17
CLIP4-203ENST00000401617 IKBKBO14920 756 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 SLFN14P0C7P3 912 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 ZSCAN29Q8IWY8 852 aaPredicted RBP13.97□□□□□ -0.17
CLIP4-203ENST00000401617 MTMR14Q8NCE2 650 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 TRIM5Q9C035 493 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 VAT1LQ9HCJ6 419 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 PIM2Q9P1W9 311 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 ZNRF3Q9ULT6 936 aa13.97□□□□□ -0.17
CLIP4-203ENST00000401617 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 VWA3AA6NCI4 1184 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 RAD17O75943 681 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 TPM3P06753 285 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.17
CLIP4-203ENST00000401617 INF2Q27J81 1249 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 TMEM179Q6ZVK1 233 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 ADGRF4Q8IZF3 695 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 MRFAP1L1Q96HT8 127 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.17
CLIP4-203ENST00000401617 SMTNL1A8MU46 457 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 LAD1O00515 517 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.18
CLIP4-203ENST00000401617 BMP6P22004 513 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 PRPHP41219 470 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 E2F4Q16254 413 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 FKBP1CQ5VVH2 108 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 TRIML1Q8N9V2 468 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 AGBL3Q8NEM8 1001 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 DCAF4Q8WV16 495 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 HDAC9Q9UKV0 1011 aa13.96□□□□□ -0.18
CLIP4-203ENST00000401617 GOLGA6L6A8MZA4 724 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 ORC2Q13416 577 aaPredicted RBP13.95□□□□□ -0.18
CLIP4-203ENST00000401617 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
CLIP4-203ENST00000401617 TTBK2Q6IQ55 1244 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 PDILTQ8N807 584 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 PYM1Q9BRP8 204 aaKnown RBP13.95□□□□□ -0.18
CLIP4-203ENST00000401617 HERC5Q9UII4 1024 aaKnown RBP13.95□□□□□ -0.18
CLIP4-203ENST00000401617 MAN1B1Q9UKM7 699 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 MORC3Q14149 939 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 SEPT2Q15019 361 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 NONOQ15233 471 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLIP4-203ENST00000401617 SPDYE2Q495Y8 402 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 DHX58Q96C10 678 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 ZBED3Q96IU2 234 aaPredicted RBP13.95□□□□□ -0.18
CLIP4-203ENST00000401617 TRIM34Q9BYJ4 488 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 TMEM60Q9H2L4 133 aa13.95□□□□□ -0.18
CLIP4-203ENST00000401617 ZNF70Q9UC06 446 aaPredicted RBP13.95□□□□□ -0.18
CLIP4-203ENST00000401617 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
CLIP4-203ENST00000401617 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
CLIP4-203ENST00000401617 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
CLIP4-203ENST00000401617 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
CLIP4-203ENST00000401617 REXO1Q8N1G1 1221 aaKnown RBP13.94□□□□□ -0.18
CLIP4-203ENST00000401617 GMCL1P1Q8NEA9 526 aa13.94□□□□□ -0.18
CLIP4-203ENST00000401617 FAM151AQ8WW52 585 aa13.94□□□□□ -0.18
CLIP4-203ENST00000401617 SMARCE1Q969G3 411 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms