RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 WDR59Q6PJI9 974 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 IRF2BP1Q8IU81 584 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 HDAC7Q8WUI4 952 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 ESR2Q92731 530 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 STAT6P42226 847 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
KDM1A-202ENST00000400181 CATIPQ7Z7H3 387 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 RRP36Q96EU6 259 aaKnown RBP20.26■□□□□ 0.83
KDM1A-202ENST00000400181 RNF41Q9H4P4 317 aaPredicted RBP20.26■□□□□ 0.83
KDM1A-202ENST00000400181 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 WDR17Q8IZU2 1322 aa20.26■□□□□ 0.83
KDM1A-202ENST00000400181 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
KDM1A-202ENST00000400181 ATF3P18847 181 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 ZNF658Q5TYW1 1059 aaPredicted RBP20.25■□□□□ 0.83
KDM1A-202ENST00000400181 PDXDC2PQ6P474 469 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 KRT26Q7Z3Y9 468 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 MTMR7Q9Y216 660 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 KRT86O43790 486 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 CXCR5P32302 372 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 TRIM28Q13263 835 aaKnown RBP20.25■□□□□ 0.83
KDM1A-202ENST00000400181 ADGRA1Q86SQ6 560 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 RASGRP4Q8TDF6 673 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 ZNF512BQ96KM6 892 aaPredicted RBP20.25■□□□□ 0.83
KDM1A-202ENST00000400181 SAMM50Q9Y512 469 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 SPATA31A3Q5VYP0 1347 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 AGPSO00116 658 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 NMT2O60551 498 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 ERCC3P19447 782 aa20.25■□□□□ 0.83
KDM1A-202ENST00000400181 AARSP49588 968 aaKnown RBP eCLIP20.25■□□□□ 0.83
KDM1A-202ENST00000400181 C1orf167Q5SNV9 1468 aa20.24■□□□□ 0.83
KDM1A-202ENST00000400181 ATP2C1P98194 919 aaPredicted RBP20.24■□□□□ 0.83
KDM1A-202ENST00000400181 VIPAS39Q9H9C1 493 aa20.24■□□□□ 0.83
KDM1A-202ENST00000400181 MAGEC2Q9UBF1 373 aaPredicted RBP20.24■□□□□ 0.83
KDM1A-202ENST00000400181 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
KDM1A-202ENST00000400181 EVX2Q03828 476 aa20.24■□□□□ 0.83
KDM1A-202ENST00000400181 CCNI2Q6ZMN8 369 aaPredicted RBP20.24■□□□□ 0.83
KDM1A-202ENST00000400181 EHD2Q9NZN4 543 aa20.24■□□□□ 0.83
KDM1A-202ENST00000400181 ZC3H4Q9UPT8 1303 aaKnown RBP20.24■□□□□ 0.83
KDM1A-202ENST00000400181 FER1L4A9Z1Z3 1794 aa20.24■□□□□ 0.83
KDM1A-202ENST00000400181 CKAP4Q07065 602 aaKnown RBP20.23■□□□□ 0.83
KDM1A-202ENST00000400181 SEC23AQ15436 765 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 TADA2BQ86TJ2 420 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 BCAS4Q8TDM0 211 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 ZSCAN10Q96SZ4 725 aaPredicted RBP20.23■□□□□ 0.83
KDM1A-202ENST00000400181 A0A0G2JS52 829 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 GLI3P10071 1580 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 MCM3P25205 808 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 DNA2P51530 1060 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 CCDC96Q2M329 555 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 ZNHIT6Q9NWK9 470 aaKnown RBP20.23■□□□□ 0.83
KDM1A-202ENST00000400181 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 EXOC5O00471 708 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 KRT83P78385 493 aa20.23■□□□□ 0.83
KDM1A-202ENST00000400181 NHEJ1Q9H9Q4 299 aaPredicted RBP20.23■□□□□ 0.83
KDM1A-202ENST00000400181 DMGDHQ9UI17 866 aaKnown RBP20.23■□□□□ 0.83
KDM1A-202ENST00000400181 LGALS16A8MUM7 142 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 PLEKP08567 350 aaPredicted RBP20.22■□□□□ 0.83
KDM1A-202ENST00000400181 IRAK1P51617 712 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 NUP188Q5SRE5 1749 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 PRPF3O43395 683 aaKnown RBP20.22■□□□□ 0.83
KDM1A-202ENST00000400181 BMP15O95972 392 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 GNGT1P63211 74 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 NPY5RQ15761 445 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 PAPD7Q5XG87 772 aaKnown RBP20.22■□□□□ 0.83
KDM1A-202ENST00000400181 LRRC1Q9BTT6 524 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 DEF6Q9H4E7 631 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 LRWD1Q9UFC0 647 aa20.22■□□□□ 0.83
KDM1A-202ENST00000400181 H7C1D1 291 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 CYLC1P35663 651 aaPredicted RBP20.21■□□□□ 0.83
KDM1A-202ENST00000400181 DYNLL1P63167 89 aaKnown RBP20.21■□□□□ 0.83
KDM1A-202ENST00000400181 TBC1D8BQ0IIM8 1120 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 FUT2Q10981 343 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 EFCAB13Q8IY85 973 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 GPATCH11Q8N954 259 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 EBAG9O00559 213 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 PDE8AO60658 829 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 STARD3NLO95772 234 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 FAM47AQ5JRC9 791 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 MLXIPQ9HAP2 919 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 RMND1Q9NWS8 449 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 GNAT2P19087 354 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 KCTD16Q68DU8 428 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 SRBD1Q8N5C6 995 aaKnown RBP20.21■□□□□ 0.83
KDM1A-202ENST00000400181 DNAJC7Q99615 494 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 CAPN11Q9UMQ6 739 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 FAM169AQ9Y6X4 670 aa20.21■□□□□ 0.83
KDM1A-202ENST00000400181 KIF5AQ12840 1032 aa20.2■□□□□ 0.82
KDM1A-202ENST00000400181 FBXW10Q5XX13 1052 aa20.2■□□□□ 0.82
KDM1A-202ENST00000400181 CSGALNACT2Q8N6G5 542 aa20.2■□□□□ 0.82
KDM1A-202ENST00000400181 GPKOWQ92917 476 aaPredicted RBP eCLIP20.2■□□□□ 0.822e-6■■□□□ 11.8
KDM1A-202ENST00000400181 CAPS2Q9BXY5 557 aa20.2■□□□□ 0.82
KDM1A-202ENST00000400181 NKRFO15226 690 aaKnown RBP eCLIP20.2■□□□□ 0.82
KDM1A-202ENST00000400181 ERLIN2O94905 339 aa20.2■□□□□ 0.82
KDM1A-202ENST00000400181 FGFR2P21802 821 aa20.2■□□□□ 0.82
KDM1A-202ENST00000400181 ATP1A2P50993 1020 aa20.2■□□□□ 0.82
KDM1A-202ENST00000400181 CCDC70Q6NSX1 233 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms