RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 TBC1D31Q96DN5 1066 aa8.82□□□□□ -1
USP47-203ENST00000399455 ZNF577Q9BSK1 485 aa8.82□□□□□ -1
USP47-203ENST00000399455 SPATA31A1Q5TZJ5 1347 aa8.82□□□□□ -1
USP47-203ENST00000399455 KLRF2D3W0D1 207 aa8.82□□□□□ -1
USP47-203ENST00000399455 TMEM191BP0C7N4 346 aa8.82□□□□□ -1
USP47-203ENST00000399455 TNNC1P63316 161 aa8.82□□□□□ -1
USP47-203ENST00000399455 SNAPC2Q13487 334 aa8.82□□□□□ -1
USP47-203ENST00000399455 HESX1Q9UBX0 185 aa8.82□□□□□ -1
USP47-203ENST00000399455 QRICH2Q9H0J4 1663 aa8.82□□□□□ -1
USP47-203ENST00000399455 AGLP35573 1532 aa8.82□□□□□ -1
USP47-203ENST00000399455 CD19P15391 556 aa8.82□□□□□ -1
USP47-203ENST00000399455 CLUL1Q15846 466 aa8.82□□□□□ -1
USP47-203ENST00000399455 Q3C1V9 767 aa8.82□□□□□ -1
USP47-203ENST00000399455 STYK1Q6J9G0 422 aa8.82□□□□□ -1
USP47-203ENST00000399455 TMEM179Q6ZVK1 233 aa8.82□□□□□ -1
USP47-203ENST00000399455 SLF1Q9BQI6 1058 aa8.82□□□□□ -1
USP47-203ENST00000399455 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
USP47-203ENST00000399455 SNX25Q9H3E2 840 aa8.82□□□□□ -1
USP47-203ENST00000399455 SLC7A3Q8WY07 619 aa8.81□□□□□ -1
USP47-203ENST00000399455 LRRIQ4A6NIV6 560 aa8.81□□□□□ -1
USP47-203ENST00000399455 TRIM14Q14142 442 aa8.81□□□□□ -1
USP47-203ENST00000399455 ZNF654Q8IZM8 581 aa8.81□□□□□ -1
USP47-203ENST00000399455 APOL6Q9BWW8 343 aa8.81□□□□□ -1
USP47-203ENST00000399455 KCNQ3O43525 872 aa8.81□□□□□ -1
USP47-203ENST00000399455 CUTAO60888 179 aa8.81□□□□□ -1
USP47-203ENST00000399455 DCUN1D2Q6PH85 259 aa8.81□□□□□ -1
USP47-203ENST00000399455 ZBTB40Q9NUA8 1239 aa8.81□□□□□ -1
USP47-203ENST00000399455 FCER1AP12319 257 aa8.81□□□□□ -1
USP47-203ENST00000399455 NFKBIAP25963 317 aa8.81□□□□□ -1
USP47-203ENST00000399455 HERC4Q5GLZ8 1057 aaPredicted RBP8.81□□□□□ -1
USP47-203ENST00000399455 BLIDQ8IZY5 108 aa8.81□□□□□ -1
USP47-203ENST00000399455 SDR42E1Q8WUS8 393 aa8.81□□□□□ -1
USP47-203ENST00000399455 TCP11Q8WWU5 503 aa8.81□□□□□ -1
USP47-203ENST00000399455 CCDC42Q96M95 316 aa8.81□□□□□ -1
USP47-203ENST00000399455 ZNRF3Q9ULT6 936 aa8.81□□□□□ -1
USP47-203ENST00000399455 DPYSL4O14531 572 aa8.81□□□□□ -1
USP47-203ENST00000399455 PPP1R7Q15435 360 aa8.81□□□□□ -1
USP47-203ENST00000399455 TBC1D9BQ66K14 1250 aa8.81□□□□□ -1
USP47-203ENST00000399455 PLEKHM2Q8IWE5 1019 aa8.81□□□□□ -1
USP47-203ENST00000399455 UBL4BQ8N7F7 174 aa8.81□□□□□ -1
USP47-203ENST00000399455 INO80BQ9C086 356 aaPredicted RBP8.81□□□□□ -1
USP47-203ENST00000399455 C1orf167Q5SNV9 1468 aa8.8□□□□□ -1
USP47-203ENST00000399455 POSTNQ15063 836 aa8.8□□□□□ -1
USP47-203ENST00000399455 UVSSAQ2YD98 709 aa8.8□□□□□ -1
USP47-203ENST00000399455 BBS5Q8N3I7 341 aa8.8□□□□□ -1
USP47-203ENST00000399455 AFAP1L2Q8N4X5 818 aa8.8□□□□□ -1
USP47-203ENST00000399455 ZHX2Q9Y6X8 837 aa8.8□□□□□ -1
USP47-203ENST00000399455 DENND3A2RUS2 1198 aa8.8□□□□□ -1
USP47-203ENST00000399455 TNPO2O14787 897 aaKnown RBP8.8□□□□□ -1
USP47-203ENST00000399455 KRT86O43790 486 aa8.8□□□□□ -1
USP47-203ENST00000399455 KIF5AQ12840 1032 aa8.8□□□□□ -1
USP47-203ENST00000399455 SPICE1Q8N0Z3 855 aa8.8□□□□□ -1
USP47-203ENST00000399455 WDR11Q9BZH6 1224 aa8.8□□□□□ -1
USP47-203ENST00000399455 TRIM35Q9UPQ4 493 aa8.8□□□□□ -1
USP47-203ENST00000399455 ZNF165P49910 485 aa8.8□□□□□ -1
USP47-203ENST00000399455 PLCB4Q15147 1175 aa8.8□□□□□ -1
USP47-203ENST00000399455 THEM5Q8N1Q8 247 aa8.8□□□□□ -1
USP47-203ENST00000399455 CEP112Q8N8E3 955 aa8.8□□□□□ -1
USP47-203ENST00000399455 FAM167AQ96KS9 214 aa8.8□□□□□ -1
USP47-203ENST00000399455 RIPOR2Q9Y4F9 1068 aa8.8□□□□□ -1
USP47-203ENST00000399455 ERCC5P28715 1186 aaPredicted RBP8.8□□□□□ -1
USP47-203ENST00000399455 LRCH2Q5VUJ6 765 aa8.8□□□□□ -1
USP47-203ENST00000399455 NEK8Q86SG6 692 aa8.8□□□□□ -1
USP47-203ENST00000399455 GPBP1Q86WP2 473 aa8.8□□□□□ -1
USP47-203ENST00000399455 TBC1D2Q9BYX2 928 aa8.8□□□□□ -1
USP47-203ENST00000399455 UNC13BO14795 1591 aa8.8□□□□□ -1
USP47-203ENST00000399455 CLTCL1P53675 1640 aa8.8□□□□□ -1
USP47-203ENST00000399455 ZBTB7BO15156 539 aaPredicted RBP8.8□□□□□ -1
USP47-203ENST00000399455 LMNB1P20700 586 aa8.8□□□□□ -1
USP47-203ENST00000399455 RPS12P25398 132 aaKnown RBP8.8□□□□□ -1
USP47-203ENST00000399455 GOLGA8FQ08AF8 430 aa8.8□□□□□ -1
USP47-203ENST00000399455 GOLGA8DPQ0D2H9 430 aa8.8□□□□□ -1
USP47-203ENST00000399455 TTLL4Q14679 1199 aa8.8□□□□□ -1
USP47-203ENST00000399455 SUSD4Q5VX71 490 aa8.8□□□□□ -1
USP47-203ENST00000399455 DDX23Q9BUQ8 820 aaKnown RBP8.8□□□□□ -1
USP47-203ENST00000399455 STAM2O75886 525 aa8.8□□□□□ -1
USP47-203ENST00000399455 TRIM50Q86XT4 487 aa8.8□□□□□ -1
USP47-203ENST00000399455 PIDD1Q9HB75 910 aa8.8□□□□□ -1
USP47-203ENST00000399455 RPAP1Q9BWH6 1393 aaPredicted RBP8.8□□□□□ -1
USP47-203ENST00000399455 URI1O94763 535 aaPredicted RBP8.79□□□□□ -1
USP47-203ENST00000399455 IGHDP01880 384 aa8.79□□□□□ -1
USP47-203ENST00000399455 TAF1CQ15572 869 aaPredicted RBP8.79□□□□□ -1
USP47-203ENST00000399455 C6orf163Q5TEZ5 329 aa8.79□□□□□ -1
USP47-203ENST00000399455 MTFR1LQ9H019 292 aa8.79□□□□□ -1
USP47-203ENST00000399455 PCDHA12Q9UN75 941 aa8.79□□□□□ -1
USP47-203ENST00000399455 F8W8V4 182 aa8.79□□□□□ -1
USP47-203ENST00000399455 ALDH3A1P30838 453 aa8.79□□□□□ -1
USP47-203ENST00000399455 FCGRTP55899 365 aa8.79□□□□□ -1
USP47-203ENST00000399455 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
USP47-203ENST00000399455 INF2Q27J81 1249 aa8.79□□□□□ -1
USP47-203ENST00000399455 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
USP47-203ENST00000399455 RNF207Q6ZRF8 634 aa8.79□□□□□ -1
USP47-203ENST00000399455 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
USP47-203ENST00000399455 SUGT1Q9Y2Z0 365 aa8.79□□□□□ -1
USP47-203ENST00000399455 NCOA3Q9Y6Q9 1424 aa8.79□□□□□ -1
USP47-203ENST00000399455 ZMYM6O95789 1325 aa8.79□□□□□ -1
USP47-203ENST00000399455 ASB14A6NK59 587 aa8.79□□□□□ -1
USP47-203ENST00000399455 SPOPO43791 374 aa8.79□□□□□ -1
USP47-203ENST00000399455 FDX1P10109 184 aa8.79□□□□□ -1
USP47-203ENST00000399455 PIK3CAP42336 1068 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms