RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 RCCD1A6NED2 376 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 GOLGA6DP0CG33 693 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 CKAP4Q07065 602 aaKnown RBP15.7■□□□□ 0.1
APOB-202ENST00000399256 PDXDC2PQ6P474 469 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 TMTC2Q8N394 836 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 MB21D1Q8N884 522 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 GOLGA6AQ9NYA3 693 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 TARSL2A2RTX5 802 aaKnown RBP15.69■□□□□ 0.1
APOB-202ENST00000399256 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
APOB-202ENST00000399256 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
APOB-202ENST00000399256 HLFQ16534 295 aa15.69■□□□□ 0.1
APOB-202ENST00000399256 TSR1Q2NL82 804 aaKnown RBP15.69■□□□□ 0.1
APOB-202ENST00000399256 CCNI2Q6ZMN8 369 aaPredicted RBP15.69■□□□□ 0.1
APOB-202ENST00000399256 IRF2BP1Q8IU81 584 aa15.69■□□□□ 0.1
APOB-202ENST00000399256 LACRTQ9GZZ8 138 aa15.69■□□□□ 0.1
APOB-202ENST00000399256 GOLGA6BA6NDN3 693 aa15.69■□□□□ 0.1
APOB-202ENST00000399256 RPN1P04843 607 aaKnown RBP15.69■□□□□ 0.1
APOB-202ENST00000399256 LIG3P49916 1009 aa15.69■□□□□ 0.1
APOB-202ENST00000399256 ZNF658Q5TYW1 1059 aaPredicted RBP15.69■□□□□ 0.1
APOB-202ENST00000399256 JADE2Q9NQC1 790 aa15.69■□□□□ 0.1
APOB-202ENST00000399256 DUSP10Q9Y6W6 482 aa15.69■□□□□ 0.1
APOB-202ENST00000399256 A0A087WUV0 522 aaPredicted RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 MACROD2A1Z1Q3 448 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 EXOC5O00471 708 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 GUCY2CP25092 1073 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 MRPS25P82663 173 aaKnown RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 TTC19Q6DKK2 380 aaPredicted RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 DNAJC7Q99615 494 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 MCM7P33993 719 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 IRAK1P51617 712 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 PMS1P54277 932 aaKnown RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 MYH6P13533 1939 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 TIAM2Q8IVF5 1701 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 ERVV-2B6SEH9 535 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 KRT86O43790 486 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 SHOX2O60902 331 aaPredicted RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 BMP15O95972 392 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 IDEP14735 1019 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 EIF5P55010 431 aaKnown RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 PPARAQ07869 468 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 PUM3Q15397 648 aaKnown RBP15.68■□□□□ 0.1
APOB-202ENST00000399256 IL17AQ16552 155 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 BRMS1Q9HCU9 246 aa15.68■□□□□ 0.1
APOB-202ENST00000399256 CPP00450 1065 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 EZH2Q15910 746 aaKnown RBP15.67■□□□□ 0.1
APOB-202ENST00000399256 NLRP10Q86W26 655 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 SDR42E1Q8WUS8 393 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 LPIN2Q92539 896 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 RRP36Q96EU6 259 aaKnown RBP15.67■□□□□ 0.1
APOB-202ENST00000399256 EEF2KMTQ96G04 330 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 RPGRIP1Q96KN7 1286 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 DEF6Q9H4E7 631 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 UBR2Q8IWV8 1755 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 KLK7P49862 253 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 KRT83P78385 493 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 CYP27A1Q02318 531 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 SEC23AQ15436 765 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 PIK3AP1Q6ZUJ8 805 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.16e-42■■□□□ 11.5
APOB-202ENST00000399256 AGPAT5Q9NUQ2 364 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 CAPN11Q9UMQ6 739 aa15.67■□□□□ 0.1
APOB-202ENST00000399256 FUT2Q10981 343 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 DNAJC10Q8IXB1 793 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 RNF41Q9H4P4 317 aaPredicted RBP15.66■□□□□ 0.1
APOB-202ENST00000399256 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 B4DLN1 442 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 H7C1D1 291 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 HSPA1LP34931 641 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 NKX1-1Q15270 411 aaPredicted RBP15.66■□□□□ 0.1
APOB-202ENST00000399256 NPY5RQ15761 445 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 ENAHQ8N8S7 591 aaPredicted RBP15.66■□□□□ 0.1
APOB-202ENST00000399256 HDAC7Q8WUI4 952 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 KAT2BQ92831 832 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 TNFRSF25Q93038 417 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 YY1AP1Q9H869 796 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 FAM169AQ9Y6X4 670 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 SPATA31A6Q5VVP1 1343 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 ADAMTS3O15072 1205 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 PRPF3O43395 683 aaKnown RBP15.66■□□□□ 0.1
APOB-202ENST00000399256 ERLIN2O94905 339 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 RCAN1P53805 252 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 EHBP1Q8NDI1 1231 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 BCAS4Q8TDM0 211 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
APOB-202ENST00000399256 CAPS2Q9BXY5 557 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 RMND1Q9NWS8 449 aa15.66■□□□□ 0.1
APOB-202ENST00000399256 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
APOB-202ENST00000399256 SPATA31A1Q5TZJ5 1347 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 TOGARAM1Q9Y4F4 1720 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 EBAG9O00559 213 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 MATR3P43243 847 aaKnown RBP eCLIP15.65■□□□□ 0.1
APOB-202ENST00000399256 GNGT1P63211 74 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 MMS22LQ6ZRQ5 1243 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 ZNF507Q8TCN5 953 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 ESR2Q92731 530 aa15.65■□□□□ 0.1
APOB-202ENST00000399256 TRIM47Q96LD4 638 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms