RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ZFP91Q96JP5 570 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 PANK4Q9NVE7 773 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 TACC3Q9Y6A5 838 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 TMEM2Q9UHN6 1383 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 TNNC2P02585 160 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 ZAP70P43403 619 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 CLNS1AP54105 237 aaKnown RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 BPIFB4P59827 614 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 TNFAIP1Q13829 316 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 RASA3Q14644 834 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 GEN1Q17RS7 908 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 TEKT3Q9BXF9 490 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 VCX3AQ9NNX9 186 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 ATG3Q9NT62 314 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 H0YIN7 160 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■■■□ 24.3
SPTLC3-201ENST00000399002 RRAGAQ7L523 313 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 ARMC9Q7Z3E5 817 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 NEK8Q86SG6 692 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 ZBTB8OSQ8IWT0 167 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 ZBTB38Q8NAP3 1195 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 FAM89AQ96GI7 184 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 DHTKD1Q96HY7 919 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 NCOA5Q9HCD5 579 aaKnown RBP9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 KLHL14Q9P2G3 628 aa9.2□□□□□ -0.94
SPTLC3-201ENST00000399002 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 FMNL1O95466 1100 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 EEF1GP26641 437 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 CTNNA1P35221 906 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 GPBP1Q86WP2 473 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 LRRC8AQ8IWT6 810 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 ARHGEF2Q92974 986 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 SLF1Q9BQI6 1058 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 TUBB6Q9BUF5 446 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 ZNF277Q9NRM2 450 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.19□□□□□ -0.945e-7■■□□□ 11.5
SPTLC3-201ENST00000399002 ADGRL3Q9HAR2 1447 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 RPN1P04843 607 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 KLHL7Q8IXQ5 586 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 TDRD7Q8NHU6 1098 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 C8orf37Q96NL8 207 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 TRIM6Q9C030 488 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 COL4A3BPQ9Y5P4 624 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 SAMD9LQ8IVG5 1584 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 ADCY10Q96PN6 1610 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 PNMA6EA0A0J9YXQ4 647 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 POLR2MP0CAP2 368 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 SCG2P13521 617 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 STX2P32856 288 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 TIMM10P62072 90 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 KRT24Q2M2I5 525 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 RINT1Q6NUQ1 792 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 KRT12Q99456 494 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 NCAPGQ9BPX3 1015 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 PPANQ9NQ55 473 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 YEATS2Q9ULM3 1422 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 GAS7O60861 476 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 KRT15P19012 456 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 IFNL3Q8IZI9 196 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 PFDN4Q9NQP4 134 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 GPHNQ9NQX3 736 aaPredicted RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 THEGQ9P2T0 379 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 IPO11Q9UI26 975 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 NCAPD2Q15021 1401 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 TBC1D8O95759 1140 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 KRT3P12035 628 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 SLC12A2P55011 1212 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 ANKRD20A3Q5VUR7 823 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 PALM2Q8IXS6 379 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 DEPTORQ8TB45 409 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 GSDMAQ96QA5 445 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 BTG4Q9NY30 223 aa9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 LARSQ9P2J5 1176 aaKnown RBP9.19□□□□□ -0.94
SPTLC3-201ENST00000399002 CPA1P15085 419 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 BEND3Q5T5X7 828 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 VPS37BQ9H9H4 285 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 C1orf112Q9NSG2 853 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 HSPA6P17066 643 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 POLR2BP30876 1174 aaKnown RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 PABPC4Q13310 644 aaKnown RBP eCLIP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 KRT81Q14533 505 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 ASPRV1Q53RT3 343 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 FAM160B1Q5W0V3 765 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 CCDC13Q8IYE1 715 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 OTUD7AQ8TE49 926 aaPredicted RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 KRIT1O00522 736 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 TFAP4Q01664 338 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 U2AF1L4Q8WU68 220 aaKnown RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 RABGGTAQ92696 567 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 POLR3EQ9NVU0 708 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 DDX25Q9UHL0 483 aaKnown RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms