RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 ZSCAN16Q9H4T2 348 aaPredicted RBP19.24■□□□□ 0.67
CDH23-204ENST00000398792 ZNF408Q9H9D4 720 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 KCNJ14Q9UNX9 436 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 AFG3L2Q9Y4W6 797 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 ATP6V1DQ9Y5K8 247 aa19.24■□□□□ 0.67
CDH23-204ENST00000398792 BAG4O95429 457 aaKnown RBP19.23■□□□□ 0.67
CDH23-204ENST00000398792 KIF23Q02241 960 aaPredicted RBP19.23■□□□□ 0.67
CDH23-204ENST00000398792 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
CDH23-204ENST00000398792 HEATR3Q7Z4Q2 680 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 CLMNQ96JQ2 1002 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 C12orf42Q96LP6 360 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 PHF20Q9BVI0 1012 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 ELP3Q9H9T3 547 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 SH3GLB2Q9NR46 395 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 EMILIN3Q9NT22 766 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 BARHL2Q9NY43 387 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 PTPRFP10586 1907 aa19.23■□□□□ 0.67
CDH23-204ENST00000398792 hCG_1984214I3L0E3 225 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 STXBP3O00186 592 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 PLA2G6O60733 806 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 VCAM1P19320 739 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 ZNF713Q8N859 430 aaPredicted RBP19.22■□□□□ 0.67
CDH23-204ENST00000398792 LOC285556D6RIA3 1793 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 SPDYE5A6NIY4 337 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 KIF28PB7ZC32 967 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 C19orf81C9J6K1 198 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 ZBTB5O15062 677 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 LDLRAD1Q5T700 205 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 TYW1BQ6NUM6 668 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 FAM160B2Q86V87 743 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 ERO1BQ86YB8 467 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
CDH23-204ENST00000398792 CCDC148Q8NFR7 591 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 CHAMP1Q96JM3 812 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 PRR12Q9ULL5 1215 aa19.22■□□□□ 0.67
CDH23-204ENST00000398792 PNMA6FA0A0J9YX94 578 aa19.21■□□□□ 0.67
CDH23-204ENST00000398792 HMGCS2P54868 508 aa19.21■□□□□ 0.67
CDH23-204ENST00000398792 FKBP1BP68106 108 aa19.21■□□□□ 0.67
CDH23-204ENST00000398792 PPATQ06203 517 aa19.21■□□□□ 0.67
CDH23-204ENST00000398792 SAFBQ15424 915 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDH23-204ENST00000398792 CDC37Q16543 378 aaPredicted RBP19.21■□□□□ 0.67
CDH23-204ENST00000398792 FOXD4L6Q3SYB3 417 aaPredicted RBP19.21■□□□□ 0.67
CDH23-204ENST00000398792 PARP14Q460N5 1801 aa19.21■□□□□ 0.67
CDH23-204ENST00000398792 FOXD4L3Q6VB84 417 aaPredicted RBP19.21■□□□□ 0.67
CDH23-204ENST00000398792 DIS3L2Q8IYB7 885 aaKnown RBP19.21■□□□□ 0.67
CDH23-204ENST00000398792 FEM1BQ9UK73 627 aa19.21■□□□□ 0.67
CDH23-204ENST00000398792 UNCXA6NJT0 531 aa19.2■□□□□ 0.66
CDH23-204ENST00000398792 PPP1R11O60927 126 aaPredicted RBP19.2■□□□□ 0.66
CDH23-204ENST00000398792 NPY5RQ15761 445 aa19.2■□□□□ 0.66
CDH23-204ENST00000398792 QRICH1Q2TAL8 776 aa19.2■□□□□ 0.66
CDH23-204ENST00000398792 SH3D19Q5HYK7 790 aa19.2■□□□□ 0.66
CDH23-204ENST00000398792 BRAPQ7Z569 592 aa19.2■□□□□ 0.66
CDH23-204ENST00000398792 RBM46Q8TBY0 533 aaKnown RBP19.2■□□□□ 0.66
CDH23-204ENST00000398792 CHURC1Q8WUH1 139 aa19.2■□□□□ 0.66
CDH23-204ENST00000398792 GBA2Q9HCG7 927 aaPredicted RBP19.2■□□□□ 0.66
CDH23-204ENST00000398792 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.2■□□□□ 0.66
CDH23-204ENST00000398792 CELF2O95319 508 aaKnown RBP19.19■□□□□ 0.66
CDH23-204ENST00000398792 ITGBL1O95965 494 aaPredicted RBP19.19■□□□□ 0.66
CDH23-204ENST00000398792 U2AF2P26368 475 aaKnown RBP eCLIP19.19■□□□□ 0.66
CDH23-204ENST00000398792 NAPAP54920 295 aa19.19■□□□□ 0.66
CDH23-204ENST00000398792 FAM173BQ6P4H8 233 aa19.19■□□□□ 0.66
CDH23-204ENST00000398792 CCDC12Q8WUD4 166 aaPredicted RBP19.19■□□□□ 0.66
CDH23-204ENST00000398792 OTUD5Q96G74 571 aa19.19■□□□□ 0.66
CDH23-204ENST00000398792 RPAP3Q9H6T3 665 aaPredicted RBP19.19■□□□□ 0.66
CDH23-204ENST00000398792 GPBP1L1Q9HC44 474 aaPredicted RBP19.19■□□□□ 0.66
CDH23-204ENST00000398792 FBXO28Q9NVF7 368 aa19.19■□□□□ 0.66
CDH23-204ENST00000398792 TRPM7Q96QT4 1865 aa19.19■□□□□ 0.66
CDH23-204ENST00000398792 BTBD18B2RXH4 712 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 CALML3P27482 149 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 KRT2P35908 639 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 NLRP5P59047 1200 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 DNM1Q05193 864 aaKnown RBP19.18■□□□□ 0.66
CDH23-204ENST00000398792 PPIL2Q13356 520 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 GNL2Q13823 731 aaKnown RBP19.18■□□□□ 0.66
CDH23-204ENST00000398792 NFKBIBQ15653 356 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 PPP1R18Q6NYC8 613 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 KIFC2Q96AC6 838 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 TANGO6Q9C0B7 1094 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 FOXP1Q9H334 677 aaPredicted RBP19.18■□□□□ 0.66
CDH23-204ENST00000398792 BRMS1Q9HCU9 246 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 TMOD4Q9NZQ9 345 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 DAGLBQ8NCG7 672 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 SLF1Q9BQI6 1058 aa19.18■□□□□ 0.66
CDH23-204ENST00000398792 RANBP17Q9H2T7 1088 aaKnown RBP19.18■□□□□ 0.66
CDH23-204ENST00000398792 ESYT2A0FGR8 921 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 IRF6O14896 467 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 MCM4P33991 863 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 SNAP25P60880 206 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 NR5A1Q13285 461 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 GALNT17Q6IS24 598 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 NOSTRINQ8IVI9 506 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 COA7Q96BR5 231 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 OPTNQ96CV9 577 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 ZMYND12Q9H0C1 365 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 PCDHA4Q9UN74 947 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 KCNH4Q9UQ05 1017 aa19.17■□□□□ 0.66
CDH23-204ENST00000398792 A0A0G2JLL6 359 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms