RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TNNC1P63316 161 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 ASIC2Q16515 512 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 CALCRLQ16602 461 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 BAG1Q99933 345 aaPredicted RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 ABCC4O15439 1325 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 PALM3A6NDB9 673 aaPredicted RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 CD19P15391 556 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 APOBEC3FQ8IUX4 373 aaKnown RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 MRPL11Q9Y3B7 192 aaKnown RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 MYL5Q02045 173 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 MCF2L2Q86YR7 1114 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 NELFCDQ8IXH7 590 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 NR1I2O75469 434 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 TTC38Q5R3I4 469 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 FAM173BQ6P4H8 233 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 CPLX4Q7Z7G2 160 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 ADORA1P30542 326 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 Q3C1V9 767 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 RILPL1Q5EBL4 403 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 CCDC17Q96LX7 622 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 ANO1Q5XXA6 986 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 CSGALNACT2Q8N6G5 542 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 IGSF22Q8N9C0 903 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 SSH3Q8TE77 659 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 COPRSQ9NQ92 184 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 KCNH3Q9ULD8 1083 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 CNGA4Q8IV77 575 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 SMC5Q8IY18 1101 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 DHX36Q9H2U1 1008 aaKnown RBP15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 MRPL44Q9H9J2 332 aaKnown RBP15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 PNMA3Q9UL41 463 aa15.8■□□□□ 0.12
PCDHA11-201ENST00000398640 VAV2P52735 878 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 GTF3C6Q969F1 213 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 RIOK1Q9BRS2 568 aaKnown RBP15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 TUBB4AP04350 444 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 NONOQ15233 471 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 KCNJ14Q9UNX9 436 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 ZWINTO95229 277 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 MIER3Q7Z3K6 550 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 GPR108Q9NPR9 543 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 SNX14Q9Y5W7 946 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 LIN9Q5TKA1 542 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 CCDC121Q6ZUS5 278 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 IFNL3Q8IZI9 196 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 DIS3L2Q8IYB7 885 aaKnown RBP15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 RDH13Q8NBN7 331 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 STK24Q9Y6E0 443 aa15.79■□□□□ 0.12
PCDHA11-201ENST00000398640 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 HERC4Q5GLZ8 1057 aaPredicted RBP15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 DEPTORQ8TB45 409 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 NOX5Q96PH1 765 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 LRWD1Q9UFC0 647 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 CAPN2P17655 700 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 CMTR1Q8N1G2 835 aaKnown RBP15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 NSMCE1Q8WV22 266 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 SLFN13Q68D06 897 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 TRIM31Q9BZY9 425 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 GAS7O60861 476 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 FAM160A1Q05DH4 1040 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 MIGA2Q7L4E1 593 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 APOL6Q9BWW8 343 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 HACL1Q9UJ83 578 aa15.78■□□□□ 0.12
PCDHA11-201ENST00000398640 PODNQ7Z5L7 613 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 SP8Q8IXZ3 490 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 JAKMIP2Q96AA8 810 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 INTS4Q96HW7 963 aaKnown RBP15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 SUGCTQ9HAC7 445 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 TNNI1P19237 187 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 ARID4AP29374 1257 aaPredicted RBP15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 KRT26Q7Z3Y9 468 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 DSCC1Q9BVC3 393 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 PPP2R5BQ15173 497 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 STAMQ92783 540 aa15.77■□□□□ 0.12
PCDHA11-201ENST00000398640 CETN3O15182 167 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 EXOC3O60645 756 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 TTLL11Q8NHH1 800 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 CCDC26Q8TAB7 109 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 CCPG1Q9ULG6 757 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 LRMPQ12912 555 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 OTUD6AQ7L8S5 288 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 AP5M1Q9H0R1 490 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 BLZF1Q9H2G9 400 aa15.77■□□□□ 0.11
PCDHA11-201ENST00000398640 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 IGSF3O75054 1194 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 POLR2MP0CAP2 368 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 HPDP32754 393 aaPredicted RBP15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 GSDMBQ8TAX9 411 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 GDF11O95390 407 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 MST1RQ04912 1400 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 PAK1Q13153 545 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 MTFR1LQ9H019 292 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms